Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR035926
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 3 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.590s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0015100.1
n.a. Ribosomal RNA small subunit methyltransferase B; TAIR: AT3G13180.1 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; Swiss-Prot: sp|P94464|RSMB_BACSU Probable ribosomal RNA small subunit methyltransferase B; TrEMBL-Plants: tr|G7KEH7|G7KEH7_MEDTR Ribosomal RNA small subunit methyltransferase B; Found in the gene: LotjaGi1g1v0015100 LjG1.1_chr1 1950159 1959193 -
3 domain predictions
 –
LotjaGi1g1v0015100.3
n.a. Ribosomal RNA small subunit methyltransferase B; TAIR: AT3G13180.1 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; Swiss-Prot: sp|P94464|RSMB_BACSU Probable ribosomal RNA small subunit methyltransferase B; TrEMBL-Plants: tr|I1JJK1|I1JJK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0015100 LjG1.1_chr1 1950665 1958895 -
3 domain predictions
 –
LotjaGi4g1v0086500.1
n.a. N utilization substance protein B like; TAIR: AT4G26370.1 antitermination NusB domain-containing protein; Swiss-Prot: sp|Q8DKS0|NUSB_THEEB N utilization substance protein B homolog; TrEMBL-Plants: tr|I3SVI4|I3SVI4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0086500 LjG1.1_chr4 11417439 11426129 -
3 domain predictions
 –