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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036224
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.329s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0238400.1
n.a. DNA replication complex GINS protein PSF3; TAIR: AT1G19080.1 GINS complex protein; Swiss-Prot: sp|Q0UPV4|PSF3_PHANO DNA replication complex GINS protein PSF3; TrEMBL-Plants: tr|A0A1J7H7L2|A0A1J7H7L2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0238400 LjG1.1_chr1 56811982 56817552 -
2 domain predictions
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LotjaGi1g1v0238400.2
n.a. DNA replication complex GINS protein PSF3; TAIR: AT1G19080.1 GINS complex protein; Swiss-Prot: sp|Q0UPV4|PSF3_PHANO DNA replication complex GINS protein PSF3; TrEMBL-Plants: tr|A0A1J7H7L2|A0A1J7H7L2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0238400 LjG1.1_chr1 56812756 56814931 -
2 domain predictions
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LotjaGi1g1v0622700.1
n.a. DNA replication complex GINS protein PSF2; TAIR: AT3G12530.1 PSF2; Swiss-Prot: sp|Q9C7A8|PSF2_ARATH DNA replication complex GINS protein PSF2; TrEMBL-Plants: tr|V7CXH2|V7CXH2_PHAVU DNA replication complex GINS protein PSF2; Found in the gene: LotjaGi1g1v0622700 LjG1.1_chr1 116996498 117006296 -
2 domain predictions
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LotjaGi3g1v0107600.1
n.a. DNA replication complex GINS protein PSF1; TAIR: AT1G80190.1 partner of SLD five 1; Swiss-Prot: sp|Q14691|PSF1_HUMAN DNA replication complex GINS protein PSF1; TrEMBL-Plants: tr|I3SFL3|I3SFL3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107600 LjG1.1_chr3 13282364 13286149 -
2 domain predictions
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LotjaGi3g1v0232500.1
n.a. DNA replication complex GINS protein SLD5; TAIR: AT5G49010.1 DNA replication protein-like protein; Swiss-Prot: sp|Q99LZ3|SLD5_MOUSE DNA replication complex GINS protein SLD5; TrEMBL-Plants: tr|I3SQA1|I3SQA1_MEDTR DNA replication complex GINS protein SLD5; Found in the gene: LotjaGi3g1v0232500 LjG1.1_chr3 36680572 36684292 -
2 domain predictions
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LotjaGi6g1v0074400.1
n.a. DNA replication complex GINS protein PSF3; TAIR: AT1G19080.1 GINS complex protein; Swiss-Prot: sp|Q0UPV4|PSF3_PHANO DNA replication complex GINS protein PSF3; TrEMBL-Plants: tr|G7JB86|G7JB86_MEDTR DNA replication complex GINS protein; Found in the gene: LotjaGi6g1v0074400 LjG1.1_chr6 14126744 14136792 +
2 domain predictions
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LotjaGi6g1v0074400.2
n.a. DNA replication complex GINS protein PSF3; TAIR: AT1G19080.1 GINS complex protein; Swiss-Prot: sp|Q0UPV4|PSF3_PHANO DNA replication complex GINS protein PSF3; TrEMBL-Plants: tr|G7JB86|G7JB86_MEDTR DNA replication complex GINS protein; Found in the gene: LotjaGi6g1v0074400 LjG1.1_chr6 14128804 14136359 +
2 domain predictions
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LotjaGi6g1v0074400.3
n.a. DNA replication complex GINS protein PSF3; TAIR: AT1G19080.1 GINS complex protein; Swiss-Prot: sp|Q0UPV4|PSF3_PHANO DNA replication complex GINS protein PSF3; TrEMBL-Plants: tr|A0A1J7H7L2|A0A1J7H7L2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0074400 LjG1.1_chr6 14134536 14136359 +
2 domain predictions
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