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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR037143
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.215s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi5g1v0096600.1
n.a. 4'-phosphopantetheinyl transferase; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A151RRT2|A0A151RRT2_CAJCA 4'-phosphopantetheinyl transferase; Found in the gene: LotjaGi5g1v0096600 LjG1.1_chr5 17077569 17093061 +
3 domain predictions
2 GO terms
LotjaGi5g1v0096600.2
n.a. 4'-phosphopantetheinyl transferase; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A151RRT2|A0A151RRT2_CAJCA 4'-phosphopantetheinyl transferase; Found in the gene: LotjaGi5g1v0096600 LjG1.1_chr5 17077602 17093098 +
3 domain predictions
2 GO terms
LotjaGi6g1v0021000.1
n.a. 4'-phosphopantetheinyl transferase family protein; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|B2RYJ4|ADPPT_RAT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A0B2RKT0|A0A0B2RKT0_GLYSO L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase; Found in the gene: LotjaGi6g1v0021000 LjG1.1_chr6 3899163 3901851 +
3 domain predictions
2 GO terms
LotjaGi6g1v0267400_LC.1
n.a. Holo-[acyl]-carrier-protein] synthase; TAIR: AT3G11470.2 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A072VJ05|A0A072VJ05_MEDTR 4'-phosphopantetheinyl transferase family protein; Found in the gene: LotjaGi6g1v0267400_LC LjG1.1_chr6 58173858 58189626 +
3 domain predictions
2 GO terms
LotjaGi6g1v0267400_LC.2
n.a. 4'-phosphopantetheinyl transferase; TAIR: AT3G11470.4 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P37695|HETI_NOSS1 4'-phosphopantetheinyl transferase HetI; TrEMBL-Plants: tr|A0A151RRT2|A0A151RRT2_CAJCA 4'-phosphopantetheinyl transferase; Found in the gene: LotjaGi6g1v0267400_LC LjG1.1_chr6 58174311 58188995 +
3 domain predictions
2 GO terms
LotjaGi6g1v0267400_LC.3
n.a. Holo-[acyl]-carrier-protein] synthase; TAIR: AT3G11470.2 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A072VJ05|A0A072VJ05_MEDTR 4'-phosphopantetheinyl transferase family protein; Found in the gene: LotjaGi6g1v0267400_LC LjG1.1_chr6 58175647 58189172 +
3 domain predictions
2 GO terms
LotjaGi6g1v0275500_LC.1
n.a. 4'-phosphopantetheinyl transferase; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A151RRT2|A0A151RRT2_CAJCA 4'-phosphopantetheinyl transferase; Found in the gene: LotjaGi6g1v0275500_LC LjG1.1_chr6 59227786 59238138 -
3 domain predictions
2 GO terms
LotjaGi6g1v0275500_LC.2
n.a. 4'-phosphopantetheinyl transferase; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A151RRT2|A0A151RRT2_CAJCA 4'-phosphopantetheinyl transferase; Found in the gene: LotjaGi6g1v0275500_LC LjG1.1_chr6 59231397 59238128 -
3 domain predictions
2 GO terms
LotjaGi6g1v0276000_LC.1
n.a. 4'-phosphopantetheinyl transferase; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39135|SFP_BACSU 4'-phosphopantetheinyl transferase sfp; TrEMBL-Plants: tr|A0A151RRT2|A0A151RRT2_CAJCA 4'-phosphopantetheinyl transferase; Found in the gene: LotjaGi6g1v0276000_LC LjG1.1_chr6 59279906 59283954 +
3 domain predictions
2 GO terms
LotjaGi6g1v0276000_LC.2
n.a. 4'-phosphopantetheinyl transferase; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|P39135|SFP_BACSU 4'-phosphopantetheinyl transferase sfp; TrEMBL-Plants: tr|A0A151RRT2|A0A151RRT2_CAJCA 4'-phosphopantetheinyl transferase; Found in the gene: LotjaGi6g1v0276000_LC LjG1.1_chr6 59280034 59283508 +
3 domain predictions
2 GO terms