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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0021000 |
| Transcript ID | LotjaGi6g1v0021000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 4'-phosphopantetheinyl transferase family protein; TAIR: AT3G11470.1 4'-phosphopantetheinyl transferase superfamily; Swiss-Prot: sp|B2RYJ4|ADPPT_RAT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase; TrEMBL-Plants: tr|A0A0B2RKT0|A0A0B2RKT0_GLYSO L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase; Found in the gene: LotjaGi6g1v0021000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:3899163..3901851) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATTGGATCTGGTAAACGTGAGTTTGAGTGACGTGATTTATGTTTGGATACATTTATCAGGAATTGGATCTGATAGA CTTGAATTGGATCTGTAAAAGGGAAAGGGGACAATTGGATCAACATTGATGCTGAAGCAACAAATTGTTGTGTTAGGATG GATCCAATTCTGGCCAGAATTGGATCAACATTTAACATCCAAACATCAATGGAGATGAAAAAATCACGTTTGAGGTCTTT AAACGTGGATCAGGCCTGATCCAACGTGCATTCAAACACACCCTACATCTGTGGATAACAAAGGTGGCAAATGAGAGAGA AGGGACAGTATGAAGTAGAATGGAGGAAGGCGTGAAGAGATGGGTGGTAGACATATCAAAGTGGGACCCAGAACCCCATG ACCTTTCCTCCGCTCTCTCCCTCCTCCCTCCGCACGAACACTCCTCCGTCACCAGGTCTCTCTCTCTCTCTCTCTCTCTA GAATTAATCCGTTGACTCACTCGCTCAATTGATTTTGTTTTGTTTTGTGCATTTTTTGGCCAGGTTTTTTAAAATGGAAG ATCAGAAACGTGCACTTGTCAGCCGAATGCTTCAGTATGCTCTTGTTCATGATGTCCTCAAAATCCCCTTTCCCCAAATC ATCATTAATAGAACACCAGAAGGCAAACCATACTTGGTATTATTATTATTCATCACTTTCAGTCACATGGCTTATTGTTT TAATCTTGACCGTTGATGGTTAGATCTAACAGTCGTGATTTATTCTCATTTTCTCACATAAGATTACCTTTCTCATAAGA TACATCATCTATATATATATATATCTTGTTTGTCTAATGTATGTCTATCAAATTGGCATAAATGAGAAATCTTATTGCAT ACAGTCAGTCATACTGCCCCTCCTCAATTCCAATGTTGTCAAATAGCCGATATAGTGGCGCTATAGCGTAGCGCTTTGAG GGCTAACCGCATAGCAGATTTTTAGCAACACCGCTCACTTCACATTCTCGTGTCACTTATCTGTTTCCTTGATCATTACC TTATTTATTTTCTCCTTTTTCCTTTCAGGATTATGATAAATCTGGTATGAAATTCCCGAATTTTAATTTCAATGTATCTC ATCACGGTGACTATGTGGCCATAGCATCTGAACCTGTATGCCTTGTGGGGATAGACATCGTCTCATATGCTATACCACAG GGAGAAACAATTACAGAATTTATTCAATTCTTCACATCATACTTTTCAAGTGTGGAATGGTTTAACATAGTCAATGCTGG CACTTCTGATGATGTCTTAATTGAATTTTACAGGTGTGATTATACTTCATCTGTAAATTTTAGTCAAAGTAGTGATTATA CTTCAGGTGTGATTTACTTTCTCTCAATGCTGGTGTTCCAGCATGCAGAGAGTCAGTAGCTTTGCTTCAGACTTGATGTT TTCATGTTTCTAGTTGTTTTTGTTTTCTTGCTTTGGAAGATATGCTGCCCCTAGTAGTATTTCTCGTATGTTCTCTCTAG TAAAACTTCTTTTTCTATAATAAAAAAAAAAGTTATTCCTCAGTTTTGCATTTTTCCAAGTTTTACTGTCTTCACAATTG TACAAACAAAAATATAAATCCTTGTACTGTTATTTGTCTGGAAAGAAGCCAAATGGCAGTGCATGAAGAACAAATTGCTC AGCTAGTGTTTTTCAAGAAAATCAGTACACTCTTAACATGAAGGCAGCTCAAGAAGTGAATTAGTTAAGGCCTTTATTTC TTGAGAGCTTGTTATACTCATGCCCTTCTGAATGCAAAATGCCCAATAATATTTAACTATGACTTTTATGCTTCTGTTCT GCCAGTTTAATGATTATCAATTTATCACATAATGTGGCAAAGTAATATTTTTATCTGCCAAACTAGTGAATTCTTAGTAA ATGTAAAATAATTCTTTCAAAAGCTTTGCAGGTATTGGAGCCTTAAAGAAGCTTATGTTAAAGCTGTAGGGAGTGGACTG ACTGAAGAGTTGAATAAAGTGGAGTTTTCGCACACGAACTGGACTAACATATCAGCTAAAATGGATGGGAAGGTTATGAC TGAGTGGAGATTCTGGCTGTTTGAACTTGGAGAAAGACATTGTGTGAGTTCCATATCAACTTTTAATAAAAATTCTTGGT TCACCTTGACAACTATGACTATAGAAATCCAAGTTCAATTTGAATCACAGGGATGGGACTGCATAGATATTTTGCATCTA ACAGTTTTTTTCTTCTTGTTGAACAGATCTCAATTGCACGAGGTCACCCAATATCAGCTTCGATCAGTTACAAATCAACG TTGAAGAAAGTGGATTTTACTGAAGATGAATATAATCTTGGCCTTCATCTTCCAAATGTTGACTTTGTTAAACTAGGTGT ACAACAACTTGTTTCAGTTTTACAGAAAGCATTTTATTGTAAGCATGGAGGTTAGTTGGTAATGTGTAAATCTTTAGAAA CGAAGGTTTGTACAAATCAATGAAAATATTGTTAGGAGATAAGAATCATATATCTCAACATCCCTCTCTCTAACTCACTA TATATGCATAGGGATTTGCTAATACTCCCACTAGATTTTATGAAGCCACAATAGAATGTTAAGAAAAAATAAAATGTGTT GAATGCTATTTTACTCCTTCATATAACATAGTAGGATAATCACTTGAGG
CDS sequence (LotjaGi6g1v0021000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAAGGCGTGAAGAGATGGGTGGTAGACATATCAAAGTGGGACCCAGAACCCCATGACCTTTCCTCCGCTCTCTC CCTCCTCCCTCCGCACGAACACTCCTCCGTCACCAGGTTTTTTAAAATGGAAGATCAGAAACGTGCACTTGTCAGCCGAA TGCTTCAGTATGCTCTTGTTCATGATGTCCTCAAAATCCCCTTTCCCCAAATCATCATTAATAGAACACCAGAAGGCAAA CCATACTTGGATTATGATAAATCTGGTATGAAATTCCCGAATTTTAATTTCAATGTATCTCATCACGGTGACTATGTGGC CATAGCATCTGAACCTGTATGCCTTGTGGGGATAGACATCGTCTCATATGCTATACCACAGGGAGAAACAATTACAGAAT TTATTCAATTCTTCACATCATACTTTTCAAGTGTGGAATGGTTTAACATAGTCAATGCTGGCACTTCTGATGATGTCTTA ATTGAATTTTACAGGTATTGGAGCCTTAAAGAAGCTTATGTTAAAGCTGTAGGGAGTGGACTGACTGAAGAGTTGAATAA AGTGGAGTTTTCGCACACGAACTGGACTAACATATCAGCTAAAATGGATGGGAAGGTTATGACTGAGTGGAGATTCTGGC TGTTTGAACTTGGAGAAAGACATTGTATCTCAATTGCACGAGGTCACCCAATATCAGCTTCGATCAGTTACAAATCAACG TTGAAGAAAGTGGATTTTACTGAAGATGAATATAATCTTGGCCTTCATCTTCCAAATGTTGACTTTGTTAAACTAGGTGT ACAACAACTTGTTTCAGTTTTACAGAAAGCATTTTATTGTAAGCATGGAGGTTAG
Protein sequence (LotjaGi6g1v0021000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEGVKRWVVDISKWDPEPHDLSSALSLLPPHEHSSVTRFFKMEDQKRALVSRMLQYALVHDVLKIPFPQIIINRTPEGK PYLDYDKSGMKFPNFNFNVSHHGDYVAIASEPVCLVGIDIVSYAIPQGETITEFIQFFTSYFSSVEWFNIVNAGTSDDVL IEFYRYWSLKEAYVKAVGSGLTEELNKVEFSHTNWTNISAKMDGKVMTEWRFWLFELGERHCISIARGHPISASISYKST LKKVDFTEDEYNLGLHLPNVDFVKLGVQQLVSVLQKAFYCKHGG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 273 | 273 | 1.1E-107 | – | |
| PANTHER | 1 | 273 | 273 | 1.1E-107 | – | |
| SUPERFAMILY | 5 | 107 | 103 | 2.35E-19 | ||
| Gene3D | 7 | 233 | 227 | 6.0E-64 | ||
| Gene3D | 114 | 230 | 117 | 6.0E-64 | ||
| Pfam | 116 | 226 | 111 | 7.8E-16 | ||
| SUPERFAMILY | 116 | 231 | 116 | 7.46E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Holo-[acyl-carrier-protein] synthase activity | Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form. |
Expression pattern of LotjaGi6g1v0021000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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