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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR037377
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.661s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0235400.1
n.a. Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|V7AWA8|V7AWA8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0235400 LjG1.1_chr1 55630124 55640810 +
2 domain predictions
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LotjaGi1g1v0619600.1
n.a. Transcription factor GTE8; TAIR: AT3G27260.4 global transcription factor group E8; Swiss-Prot: sp|Q9LK27|GTE8_ARATH Transcription factor GTE8; TrEMBL-Plants: tr|A0A0S3RVN8|A0A0S3RVN8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619600 LjG1.1_chr1 116653053 116659816 -
2 domain predictions
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LotjaGi1g1v0619700.1
n.a. Transcription factor GTE8; TAIR: AT3G27260.4 global transcription factor group E8; Swiss-Prot: sp|Q9LK27|GTE8_ARATH Transcription factor GTE8; TrEMBL-Plants: tr|I1MLM9|I1MLM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619700 LjG1.1_chr1 116661317 116669820 -
2 domain predictions
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LotjaGi3g1v0246800.1
n.a. Transcription factor GTE4; TAIR: AT1G06230.1 global transcription factor group E4; Swiss-Prot: sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4; TrEMBL-Plants: tr|K7KXX1|K7KXX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0246800 LjG1.1_chr3 40647002 40653396 +
2 domain predictions
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LotjaGi3g1v0449500.1
n.a. Transcription factor GTE4; TAIR: AT1G06230.1 global transcription factor group E4; Swiss-Prot: sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4; TrEMBL-Plants: tr|K7M2K1|K7M2K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0449500 LjG1.1_chr3 86301275 86305628 +
2 domain predictions
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LotjaGi4g1v0042000.1
n.a. Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0042000 LjG1.1_chr4 4958534 4961912 -
2 domain predictions
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LotjaGi4g1v0042000.2
n.a. Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0042000 LjG1.1_chr4 4958736 4961913 -
2 domain predictions
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LotjaGi4g1v0223700.1
n.a. Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|K7KMV6|K7KMV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223700 LjG1.1_chr4 52918905 52926817 +
2 domain predictions
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LotjaGi4g1v0223700.2
n.a. Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|K7KMV6|K7KMV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223700 LjG1.1_chr4 52918905 52927081 +
2 domain predictions
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LotjaGi4g1v0382600.1
n.a. Transcription factor GTE12; TAIR: AT5G46550.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9LS28|GTE12_ARATH Transcription factor GTE12; TrEMBL-Plants: tr|A0A1J7IVH6|A0A1J7IVH6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382600 LjG1.1_chr4 76130608 76134849 +
2 domain predictions
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LotjaGi6g1v0314400.1
n.a. Transcription factor GTE12; TAIR: AT5G46550.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9LS28|GTE12_ARATH Transcription factor GTE12; TrEMBL-Plants: tr|G7ILV8|G7ILV8_MEDTR Global transcription factor group protein; Found in the gene: LotjaGi6g1v0314400 LjG1.1_chr6 63258562 63265302 -
2 domain predictions
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LotjaGi6g1v0347400.1
n.a. Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347400 LjG1.1_chr6 66024027 66030369 +
2 domain predictions
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