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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0382600 |
| Transcript ID | LotjaGi4g1v0382600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor GTE12; TAIR: AT5G46550.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9LS28|GTE12_ARATH Transcription factor GTE12; TrEMBL-Plants: tr|A0A1J7IVH6|A0A1J7IVH6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76130608..76134849) extracted from Lotus japonicus Gifu genome v1.2.
AGTGAAGCAAAAAAATCGTGAAGCGTAAAAGTTACGCAATGGCGCGTGAGCGCGTGTAATTTGGCGCGTCCTTTGATAAC CTATAAGAACAAGAGCGCGTTCTTTTAGCGACGATAAACCCAAAACCCTAAACCCTCACTCTGGTTTTTCTCCTAATTTC TCTTCCTTTCTTCTCCATCTCTCTCTCTCGTGAATTCAGGTACATTGTTTCATTCAAATTTCTCGTTAATTTTATGTACC TTTTCTTTCTGATTCTGAATTCGATTTTATGCCGAAATTGGGGTTTCTTGGTTTTTTTTGGTGGGTTTTTTCTTCTATTT GCAGAATTCCCAAATTGAAATCACATTGATTGAATATATTTGTATGGGTTACGTTAATTTTTTCATTTGGGTATGCACCA ATTGATTTTTTGCTTTACTGGGTCGATGTCTGCTACATGATCATGTGTGTTTCCGTGATAAAAATCCTTAATTTTTTCAT ATTTGTAGTCGACTTGTATGATGCCATATTTTAACTCTAAGAAACCCTAAATTAGTTATGTGCCGATTTTGAAATTGCCG AAGTATAGACACTTTTTGGTTTTGATAGTTCCATACAGTATCTTTTTGTGATATGTACATTTAGCTTGAATTAACAAGTA AATAGTTGTTGTGTTTTTTTGGTGATACTGATGTATTTTCGTTATTGTTGCAGAGATTACTGCTGTGTTCTTTCTTTCTG GAATTTATTTGGGGCATCCTAGGTAGCTAGCTTGCTTCCCAAGTAACCATTATTTGTTGATGCCTTTGCCTCTAAGGACA TCTCCGTCACGCGGTGTTGTTTAGTTCATCATCATGATGGCATTTGAAACAATAGCACCGAATATGAAAGTAAATCTCCG GTTACCCCCCAAAAAAATTGGAGTTGGTTATGGGACAACAAAGGGTGAGCATGGAGAAAGAGTATCGCGTGTTGATGAAA ACAGATGCTGTAGTCCAAAGAGAAAGTTCTCTGTCTCAGGTTCTGTCAAGAGAGGACCTCAAGGTTGTACTGAGGGACAA AAGGTGAAGAGGCAGAAGATGGATCGGAGAGTATCACTGCAATGTGCTAGCATTCTGAAGAGTCTGACATCTCATAGATA TAGCTGGGTTTTTATTAAGCCTGTGGATCCTGTAGCATTGAACATTCCAGATTATTTCACAGTCATCTCTCGACCCATGG ATTTAGGCACAATCAAATCCAAGCTGGAGAGAAATGTTTATTTTGACATTGACGAATTTGCAGCTGATGTAAGATTGACC TTTTCCAATGCCATGACATATAATCCTCCTGGTAATGATGTTCATTTAATGGCGAAGACACTCTCAGGATTATTTGAGAG TAAATGGAAAGATATAGAGAAAAAATCGAAGTGTGAAGGTGAGCATGGAAAAAGCATGGCAGAAACAGTTAGGAATACTG AGAAAAAAATTTGTAATGCAACACACCTCCTGCAAAAAGATAGCTTCCCCAAAAAGTCACAAGCACCTGAACTGAAAGGA ATTCAGAAGATAAGTTCATTGGCTGGAAGACATCCTAAAGTAAGTTTTGTAATGTTCTATCTACCTCTGGCCACATATTT ATGTTTGCATCTTCTGTTTGTTTAACGTAGTTTCATAATGTTTTGTTTATAGGAGGAGGTTCCTAAGTTGTCTCAGATTC CTCGCAAATTTGCTGGGAAAGACTTGCGCAAAGGTACTAAACATTAAAGGGGTTGTTTGGGAGTGTTTTATGTTGGGGAA GGGGTGGTGGAAGCTCAGATTTTTCATTTTATCTTGATAATTTTTTAGAATGTAAGTTATAGGATGATAGATAATATATA CTTAATGTCCTAATACTTTATTATTATCATCAACATTGTATAATTCTCTTGATTTAAAAATTGAAAAATTGTCCTTCTCT CCTATCTCCTTCAAAACCCCCTCCCAAACAACCTGTAGTACTGATATATGGCTATGTGAAGGATCTAATAGCTGTGTCTT TTATGGGTAAAGATAAAGGAGATGGAAGACATCCTTCTTCTGGCTCTGGAAAGGCATGTCCTACATTGGGTCTTTCCACA TGCAAGTGCAGTATTTGTGGTGACACCCCTTGCGTATGTGCATCTGATAGTGATCTAACACGTATATCTTCTGAAGGATC ACAAGGAAGAGATTTACATGTATGTGGCGCTGACTCATTGAGACTGGTTTTAATTAAACCAATATCTTTTACATGCAAAT CTAAGAAGAAATTTTGTATCCAATTGCAGGATGACCAGGCGCATCGTAAATTACCTTTGCAAAGGAAAGCTAGACTTGAT TCTTATGGTGAGAAGACCATGAGTCATGATGGTGCACATACATGTTCTAGTTTCCAGCTTACAAAACCTGCTACTGATGC AGCTTCTGGGGAAGGTCAGCTTCTCTTCCATTAATGCTTAACTGCTCCTGCATTTTATTCTGTGAATTGGTAGATACTAA TTTCCATTATATGTTTTTCCTTTTCTTTGTAGTATGGAGCACTCCTGTTATTGATGTTCAGATGTCACCTAAAAAGGCTC TCCATGCTGCCATGCAGTTAAGACGCTATAGAGATACCATCTTGAAAGCAAAACAGAAAATGTATCTTGATCATGTAAGC TTATGTGGAGAGGAGAGGGTATATCGATTATAGTTCCATATCTTTGTGTCGTAAAATGCAGCTTGATTCCTAACTATTTT TGCTTTCTATGTTCAGGGTTATAAAAGTGATTCATGGAAAATACAGCAGGAAAAGGAGAGGTTGGAAAAGATGCAACGTG ATGGTAAATATAACATCTCTTCCTACTTGGAAAACAAAATGCTATTTGGTGTTACCATTGTTTTCAAACTTAATACTCAT AATTAAGCATTGTTTGTCTCCCCAAATTTTTTAAACCTTTGACTTCAATGTGATATTGACACGTGCACATATTCCGATGT TGCATAAAATAGTTTACCATTTGCGTTATTTACTTGAATTGTGATTTTTAAACCATGAAGCTTTCTTTCTTGGCGTCTAA TGTGAGTTGGTTAATATGCTGCAGAGAAAGCCAGAATTGATGCCCAAATTAAAGCTGCTGAAGTTAAGGCTAAGCAAGAT AAGCAACGAAGAGATAAGAAAAGAGAAGCTGCCCGAATTGCAATACAAAATGTATGTTTGTTTCTGCATCTCTTTTAATA ATTTTCCATGCTCAACTCACAATATAAAATTGACTATATTATTATTACTTTTAGATGGATAGAACTGCAAAGATGGAGAA TAACTTAGAGAGTCTGAAGGAGCTTGAATCGTTGAGTGGGGGGAAGTTATATTATCCCAGCCTGGGCAGTAGTCCCCTGG AGCGGCTTGGTTTTATTATGAAGGATGAGTACATTAGCTTAGATGAAGACGAGGTTCTGAATGATATAGAAGAAGGAGAG ATTTTGTCTTGAAGGATTCAGGATTAGGCAGAAGTTTTTCTTGGAAGATTCGAGATTGTTATTTCTGATATATCATTTGT TTATTCTTCCTTTTTTGGTATGGAAACAATCAGTGTAAATATCAAACAGTGAGATAGGTTCAAGTAAATAGAATCAAGGC ATTACATCTTTTTGTCCGACTTAGGTTATGTTTGGTTTGGAAGGAAAAGTGAGAGGAAAGAAAGGAAAAATAAAGGAAAA GGAAAGAAAAAAAGCGGAAAGTGAAATGTTTTTTTAAGTTGTTTTTTTTGGTAGATTGGAAAATTATAAACAACAGCAAA AACAAAAAGATGGCCTAGCCATGCTCCAGCGCGCAAAGGACCTCTTTTGGAGGAGTTCCCCACGTTTTCAACCTCGATAT ATCATTTAGCCTCAAACTAGCAAGTACATCTGCAGGTTTGTTTCGCTCCATTGGGACATGGTGGAAGGTAAGCTCCCACT CTTGTTGGATCAGCACCCTCGCTTCTGCTATGTAGGCTGCACAAGCATAAAGATTGAGCGAAGTTGAATTGTAAGGCAGT TCACCACGTCCAAACAATCCATCTCACACACTACTTTCCGCGCACTGGTATGCCGCGCCAAAGAAAGGTCGTGGATAACA GCTAGAAGCTTAGCTAGATAAACATCTTCAATTCCCTCAAAACTAGAAAAACCAATTATCAAGCTCCATGATGGTTACGC AACAAGCCGCCACAACCCATAAACGACGAACCCTATTAAAACTCCCATCCGTGTTCAGTTTAAACCAGCCCGTCGGAGGT GC
CDS sequence (LotjaGi4g1v0382600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGCATTTGAAACAATAGCACCGAATATGAAAGTAAATCTCCGGTTACCCCCCAAAAAAATTGGAGTTGGTTATGG GACAACAAAGGGTGAGCATGGAGAAAGAGTATCGCGTGTTGATGAAAACAGATGCTGTAGTCCAAAGAGAAAGTTCTCTG TCTCAGGTTCTGTCAAGAGAGGACCTCAAGGTTGTACTGAGGGACAAAAGGTGAAGAGGCAGAAGATGGATCGGAGAGTA TCACTGCAATGTGCTAGCATTCTGAAGAGTCTGACATCTCATAGATATAGCTGGGTTTTTATTAAGCCTGTGGATCCTGT AGCATTGAACATTCCAGATTATTTCACAGTCATCTCTCGACCCATGGATTTAGGCACAATCAAATCCAAGCTGGAGAGAA ATGTTTATTTTGACATTGACGAATTTGCAGCTGATGTAAGATTGACCTTTTCCAATGCCATGACATATAATCCTCCTGGT AATGATGTTCATTTAATGGCGAAGACACTCTCAGGATTATTTGAGAGTAAATGGAAAGATATAGAGAAAAAATCGAAGTG TGAAGGTGAGCATGGAAAAAGCATGGCAGAAACAGTTAGGAATACTGAGAAAAAAATTTGTAATGCAACACACCTCCTGC AAAAAGATAGCTTCCCCAAAAAGTCACAAGCACCTGAACTGAAAGGAATTCAGAAGATAAGTTCATTGGCTGGAAGACAT CCTAAAGAGGAGGTTCCTAAGTTGTCTCAGATTCCTCGCAAATTTGCTGGGAAAGACTTGCGCAAAGATAAAGGAGATGG AAGACATCCTTCTTCTGGCTCTGGAAAGGCATGTCCTACATTGGGTCTTTCCACATGCAAGTGCAGTATTTGTGGTGACA CCCCTTGCGTATGTGCATCTGATAGTGATCTAACACGTATATCTTCTGAAGGATCACAAGGAAGAGATTTACATGATGAC CAGGCGCATCGTAAATTACCTTTGCAAAGGAAAGCTAGACTTGATTCTTATGGTGAGAAGACCATGAGTCATGATGGTGC ACATACATGTTCTAGTTTCCAGCTTACAAAACCTGCTACTGATGCAGCTTCTGGGGAAGTATGGAGCACTCCTGTTATTG ATGTTCAGATGTCACCTAAAAAGGCTCTCCATGCTGCCATGCAGTTAAGACGCTATAGAGATACCATCTTGAAAGCAAAA CAGAAAATGTATCTTGATCATGGTTATAAAAGTGATTCATGGAAAATACAGCAGGAAAAGGAGAGGTTGGAAAAGATGCA ACGTGATGAGAAAGCCAGAATTGATGCCCAAATTAAAGCTGCTGAAGTTAAGGCTAAGCAAGATAAGCAACGAAGAGATA AGAAAAGAGAAGCTGCCCGAATTGCAATACAAAATATGGATAGAACTGCAAAGATGGAGAATAACTTAGAGAGTCTGAAG GAGCTTGAATCGTTGAGTGGGGGGAAGTTATATTATCCCAGCCTGGGCAGTAGTCCCCTGGAGCGGCTTGGTTTTATTAT GAAGGATGAGTACATTAGCTTAGATGAAGACGAGGTTCTGAATGATATAGAAGAAGGAGAGATTTTGTCTTGA
Protein sequence (LotjaGi4g1v0382600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMAFETIAPNMKVNLRLPPKKIGVGYGTTKGEHGERVSRVDENRCCSPKRKFSVSGSVKRGPQGCTEGQKVKRQKMDRRV SLQCASILKSLTSHRYSWVFIKPVDPVALNIPDYFTVISRPMDLGTIKSKLERNVYFDIDEFAADVRLTFSNAMTYNPPG NDVHLMAKTLSGLFESKWKDIEKKSKCEGEHGKSMAETVRNTEKKICNATHLLQKDSFPKKSQAPELKGIQKISSLAGRH PKEEVPKLSQIPRKFAGKDLRKDKGDGRHPSSGSGKACPTLGLSTCKCSICGDTPCVCASDSDLTRISSEGSQGRDLHDD QAHRKLPLQRKARLDSYGEKTMSHDGAHTCSSFQLTKPATDAASGEVWSTPVIDVQMSPKKALHAAMQLRRYRDTILKAK QKMYLDHGYKSDSWKIQQEKERLEKMQRDEKARIDAQIKAAEVKAKQDKQRRDKKREAARIAIQNMDRTAKMENNLESLK ELESLSGGKLYYPSLGSSPLERLGFIMKDEYISLDEDEVLNDIEEGEILS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 521 | 505 | 7.6E-103 | – | |
| PANTHER | 17 | 521 | 505 | 7.6E-103 | – | |
| Gene3D | 56 | 195 | 140 | 5.1E-44 | ||
| SUPERFAMILY | 73 | 185 | 113 | 6.41E-39 | ||
| SMART | 73 | 183 | 111 | 2.9E-37 | ||
| CDD | 80 | 178 | 99 | 3.05772E-59 | ||
| Pfam | 84 | 167 | 84 | 1.6E-20 | ||
| ProSiteProfiles | 92 | 164 | 73 | 20.075 | ||
| PRINTS | 95 | 108 | 14 | 6.7E-21 | ||
| PRINTS | 111 | 127 | 17 | 6.7E-21 | ||
| PRINTS | 127 | 145 | 19 | 6.7E-21 | ||
| PRINTS | 145 | 164 | 20 | 6.7E-21 | ||
| MobiDBLite | 235 | 276 | 42 | - | – | |
| MobiDBLite | 237 | 270 | 34 | - | – | |
| Coils | 438 | 458 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0382600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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