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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0619600 |
| Transcript ID | LotjaGi1g1v0619600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor GTE8; TAIR: AT3G27260.4 global transcription factor group E8; Swiss-Prot: sp|Q9LK27|GTE8_ARATH Transcription factor GTE8; TrEMBL-Plants: tr|A0A0S3RVN8|A0A0S3RVN8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116653053..116659816) extracted from Lotus japonicus Gifu genome v1.2.
GTGCGTTGTTCAAACGTGGTAGTCTGGGCGAAGCCACCATGTGCGGCGCAATAGTGGTAGTTGGGGGAGGCGGTGCAAGA CTTTTATGGGATACGGTAGAAAGACTCCAGATCTGCACGGATCTGAAAAGACGGTGTATTCGGCGGTGATTTCCGGCAGT GGTGGCTTGCGGTGTGAAAGTGGAGATGAGTAACTGATCGATGACAAGAATAGCTTCACTGTTTTGGTGGCTCTAATGGC TGCAAACAGGTTGGCGATGGAGCGTCACGTCTCTGTGTGGTGAGGTGGGAGGAGATGATGGATGGGCTATTTCTGAAATA ATGGAATTATGAGAAGGATATTTTTGGAAATACACAGTCACCTAGAGTAACAAATCTGTTGTCGTCGCTCTCGTGCACTA AATTGCTCGTACCAAATAGCATAGCTCATAGTTTTTTTTACAATAATATTATTTACAAAAATGATAAAATCACTATTTTT TTGTATAAACATCTGGGCCCCGATTACTCTTTAGAGGTCGGCAGCCGTCTCGCTCCTATCGCTCTGTTGGTTGACAGCCC CTATTGCTAATCAGAGAGAGGTAGCGAATCAAATGTTGTGGCGGCCTTGATCTCTTCTTCTTTCCGCCCTCTTTGCCGCA ACTATTCCACCTGGACTCTAGGGGTATAAAACCTTCAAAAAAAAAAAAAGACTCTAGGGGTATACTAGTGTCAATAGGCC TGCTTATTTTATCTCTCCCTCGTGACCAACAAAAAAGTGGGGCTGCGCCCCCGTTGTACACTCCCTTCATTCTACGAACC CTTATTGATTCTAAACTTCGTTCGCGAAGGAACCCGACGTTTGACGGGCCGGGATTTATTGAGTCTTATTTTGATATGAT GTCCCTTTACATTGATTGCGAAATTGATGAAAATGTTGGCATCCGTTACTGCCCATCCGACGGCTAGTATTCAATGTCCC TCCGGTACAAATAAAAAACACGTAGGGCTCATATAATTAGCTGCGCGAATTCACAGTAAAGGGTGCGTGCGACTTGCGAG AAACACTCGCTCTCGCCACCTCTTGCTCTGCGACGCCGCCGCCGTTCACTCCTTCCTCTCCACTTCGAGCGAAGTTGCTT GCGAGAACGCGCACGCTGTTGCCATCAGCCATTTCCTTCCGCTAGGGTTTTGAACTCGCCGCGACTACTCTCTCGGAACG CTGCATTTTCAGTTAGTGTCTGGTAATTCTGTAGTGGAAGTTTGTGTGTATTGTTATTGTTCATGTAGGGTTTAAGAAGT TCTGGAAATTGATATTTTGAATTTGTTGTGTTCGTTTTCAAAAATTTCTTAGCAGTTTCATTGATTTCCGCTTCATTTGC CCAATGTGTGTTGGAAGTTCATTTTGCATTAGGGTTCCGAGTAATGAATAGTGCCGTGTTTTTCAGGTAGTCAATAGGAA CTGTATTGCAGCATTTGGTTTAACCGCGGAACTTGGTGATAATGGCGAGGAGTAGGCTTTCTGGAGGATATTCTGGTAAT GCAGTAGAGACGGCCAGTGAATCGGATGGGTCTGGTGTATCGGGGCGAATGGATGCTGATAGTACTGTTTTGGAGGACTC TAGTATGCCTGTGAGGAAATGTACTGGTTTGAATTCGAGCCGGCGAGATGCGTTTCGTGTTCCCGTCCAAGTTATTCCAA TGTCAAATTTGTCAGAAATTAAAAGAAAAGGTCTGGTACGGCGGTTAAAATCGGAGCTTGAACAGATTAGGTTAATTCAA AAGAAAGTTGAAGTACGAAAAACTAATGGTGCTATGTTGTCACCATCCAGTGTAATTCAGAGCTTTAGCAATGGCCATAA TAATGGGCCTTGGACAGAGAACCCAAGAGAACCATCAATTTCCAATTCTGTACCAGGGAATGGATTGAAACCATCAGGCC AGAGTCAGAAGCCTCGTGGATGGAATCGTGGCTCTGCCGAGAAGTTTGCTCCTGCGGCGTGGACTTCTTCACCGAGCGCC ACGAATGCTTTGTTGATGAAAGATTGTGAGCCACTGTTGAAACGGTTGATGAATCACCAGTTTGCTTGGGTTTTCAAAAC CCCCGTAGATGTGGTGAAGTTGAACCTTCCGGATTATTTCAGTGTCATTAAGCATCCTATGGATTTGGGAACAGTAAAAA CCAAGCTAGCTAAAGGAGTATACAGAGATCCATTGGAATTTGCTGGTGATGTGAGGCTTACATTTTCAAATGCAATGACC TATAATCCACGTGGGAATGATGTCCATATCATGGCTGATACCCTTAGTAAATACTTTGAAGTGAGATGGAAATCAATTGA GAAGAAACTGCCTAGAAAAGATGCTCAACGATTGCCTACAAAGCCTGCTACTTCAGATGATGTGGAAACTATTAGACCAG TGCCTCCTTCAAAAAAGAGGAAATTGATCTCATTGTCCCCTCAGCCTGAAGTTATGCCACCGGCTAAGCAGGTTATGTCA GATCAAGAGAAGCTTTGTCTAGGGAGAGAGCTGGAGTCTTTGCTAGAAGAAGAACCTGTCCATATCATTGATTTCTTAAA AGAACATTGTTCAAATGGTGGAGAATGTGCAGAGGATGAGATTGAGATTGATATTGATGATCTCAGTAATGATACACTGT TCACATTACGAAAGCTGTTGGATGATTTTAAGCAAGAGAAGCAGAAGGACAAAGCAAAAGTTGAAGCCTGTGAAATAGAG GTACCTCCCCTGCTACCTAGCCCTTCATATATTAAGCTAGTATCACATTTCATCTAAAATGCACTCATTCTCCCTCCTCA TAATGAGATGTCGGTCTCACAAAATATGTGATATACCTTCTAGCTGTTAATGTTTGCTTTTGCAGCTGCTGAACGATTCT GGACCAAGCAATTCCTCAATGCAAGCATTTAAAGGTTATACTGAGTTTTTGTGTCTGGGTGAACACATTTATATCTGTGT GTATATTTTCCTGTTTAAATTCGTTCTACTTGTAGGTAATGACTCAGCTGATGAAGAGGACATTGGTAGAAATGAGCCCC CTGTGTCTAGGTATCCTGCAGCAGAGACTGAAAAGGATAAAACATACAAAATGGACAAACATTCAAGTCTAGGCAGCAGT GGTAAGTGAAGTTTGAATTTCTGTATGAATCTCTTACTTCTACCTTGTGTTTGAGAATATCAAAGACTTTATTAGTTAAA TATTTTGTTTCGATAAAATAATTAAATCTAATTTATTTACCAAATCTTTTCTTTGAATAAAGTAATTAGGTTTTCCTTAT TTTAAGAATTAGCTCATGTTCCAAATATGATTGATGGAATTAATATCCAAAATTAATGTATCTCCCCTGCACCAAATTTG AGGATTCATTTACGTAGTTATGATTGGAAGACAAAATTTGAATTCTGGAAGCATCAAAATAAAGGGTGAATTGAAAATGA AAGCTAGTGATTTGGCTACATTTTTTTTTGGAAACGAAAGCAATAAAATCTAGCTCCAAGCGTCATAGATTAAAGTGTAA TACATTCTGCCCTCGATCAATACAAAACTTGATGAAGAAACCTCAAAATCCAACAAAATTGAAACCTGTCACTATGGCAA TGATGACAAAGAAAGTGGTGGTTCTCCTGGAGCAACTGATGAATGAATAATCCTGGAATTTCAGAATTTCACCTGTTCTG GTGTAATTTAAATTTCCTTATTTTTGGGGTAGTAAAATACTCATCTAGATGACTTGGGAACGGTAGTAAAATTTCCTTGA AAGTGACTTTTTGTTGATTCATTACGATTGGTGAAGGAAATCTGTTTTGTTGTATTAGAAATTTTGAAAGCTCTTTTTAT TTGCATATCTTCATTAAAGGGTGGGGATCACTTGATGACGAGGGTGGATTTGCAATCTAATTATATTAATATACATGTTA CTGGATATCAGCCATGTTCAAGTTACATCTTAGATGATATTGTCCTTAGGAAGGGTAGAGGAAAAATAAGGGAGAGGTAG AGACTAGAGAAGACTTTAGTTCGTATCAATATCGCTCCCAAGGCATAGTGTTTCTTCCACATAGGTTAATTCACAGTAAT TTTATTTTTCATCTTATTTAGGAAGAGGAAGACATGCCATTCTGCATTTTTGTAGGACTGATATTAGAATCTTGTAATTG GGTAATTGTTTGTAATGCAAGGTGCATTCATGGGCGGAGATGTATGTCTTGATCTTCTTTCTATGAATTATGTGTCGGAT TGTCAATTTTCAAGGAAGGATAAATTCATGATCAGGTCATCAGGTTTTTGATACATAACAATAATTAAAATCATGAATAG ATCATAAGTTTGCTACTAACTGTTCATATCATTCATGACTAACTGATTTGGTGTTTGATCCTTACTGCTGATCTGCCCCT ATTATTGTAATAGAATAATCAAGAATCTATGTGTTCTGTTTTCATTTTCTGCTTTACTTTTAATTACCTAAATGTTACTT CATCTCCTATTTTCATAGATTGACACAGTAAACAGTGAAAACATAAATTGTTTTCACTGTTTTCTTTATAAAATATCTAA AACAGGAAGTGGCATAATTAAAAGTGAGAACAGAGAACAAGAATAGAACACATTTACTGAAACTAAACAGACCCGAAATT TCAGGACAAGTAGATCTGTGCACTGTCGCCCTTTAAGCCCGAAAGGTTATTGTGTGAATAGATGTGGTAGAGATGTTACA GAAAACTAATGTATGTTTTCATCTAATAGCCTAGTGTGTGTTTGGATACTAGTTGAGTACAACATGCACAAATTTCCATT CCAATTTATAAGAAGGGTTCTGTTCCTTTTTAGTCTTGAAGCGCATGTAAATGTCCGTTTGCACTGGCAAATGTTAAACC AAACTTATCCTAGGCTTTTGGAATGGTTGGGTTATGACAAGTCATTTGATTGTAGTTTCATTTTTGATATTTTTAACACA AGTTGCTTTGGACATGTGACAAGTAGTATTTTTGTCATATGCATAAAACTTGAATAAAATTGAGCAGTACTATAATCTGA AAGAACACCCAAGTTGCAAATGAAAAGAAAATGTCATTTCCTTTTTTTTGTGTGTGGTAATTATTGCTTTATTATTCAAT AATAGTAATAATAAATTGTTGCTCGTACATCTATGTTCCCCTTGGACATTTCAGACTTGAATTAACAACTATTATTTCGA TAATATTATTAGACATGTGATAAACTTGTGCTTCTGTACTTGGTAGTCTTGAATTTTCTTAGATGTTCCTTCAATATTCG TCGCAATTAAATTTCTTCGGTGTTGCTATATTGTCTTACACTCTTATCTTTTACTTCTGACAGAATCTGTCAGTGACTTG AATAAACTTAAGGACGACTCTCAGCAAAAGCTAAGTTCTTTCAACTCTGATTGCTATGAAGATGGTAAGAGTGTGTGGAT TGTTGTGGAAGATATTTTTCCATTGTTTTATTCAATCTCAAGAGACCTTTTATCTTGTTTTAGGAGAATGTGCTCCAACA GAGAGACAGATCCCTGATAAACTTTATCGAGCCGCATTATTGAAGAATCGATTTGCTGATACTATCTTGAAGGCTCGAGA AAAGACACTGGCACATGTAAGTCACATCACATGCTTCGAGCCAACATGAAACTCTGCCTGTAACTTATTTTCTGACATTG TTCAAATTGTGTGTGGTTTATTCAATTATCTGGCTGAGGGCAGGTTGAGAAGGGAGATCCTGAGAAATTGCGGCAGGAGA GGGAAAAACTGGAAATGGAGCGACGTAAAGGTGATTTTGGTGTCACACCTTTGTGAGTGCTGTGTGCCCATACTGGCTAT TGGACATTAACTAACCTATCTGTTGATCTGACACATTATTGAGCAGAAAAGGCAAGGTTACAAGCAGAAGCCCAAGCAGC TGAAGATGCTCAAAAGCGGGCAGAAGCACAAGCTGCTGCCGAAGCCAGACGAAAGAGGGAGCTTGAGAGAGAAGCGGCAC GGCAAGCACTGCTACAGGTAAATAAGAAGTGCCTATCGTGCCTGAAATATGTCAATTTGCTTGTTTGTTTTGGATTTTAT AGCAGTGTATACCGACATCTGTGCAGTTGGAAAAAACTGTTGAGATCAATGAGAATTCTCGAATTCTTAAAGATTTGGAA ATGCTTAGAGCTGTACCTGGTGAGCAATTGCCTAGCTCCATATATGAGACGAGTCCTGATCAGTCTCAGGATGCCGTAGA TTGTTTCACGTTTGATGGTAGTAATCCCTTGGAACAACTAGGATTGTATATTAAAGCTGAAGCTGATGATGACGAGGAAG AAGATCCACAATGTGCTCCAAATCCTTTAAGTGATGTAGAAGAGGGAGAGATTGATTAAGGTTATGCACATTTTGTATGA AGAGCCAAGAAGCAAACTGTTGTTATCTAGATCTCTAGGCCATTCCCCTGATATTCTAGCCAGCGTAATGCAGCAGCAAT CCATCACAAATGGGACAGAGCACTATTTTTTGGTACCGGATTTCATACTCTAAAACGACGTTATTTTACTTTTTTGGGTT TGTTTTGGCAACAGATCAGAGGTTCACAAACTAAGTTGTTCAGACAAAGAAAAGAAGGGATTCAAAGTTACATTTTTTTG TTTTTGACTAACAAAAAGGTTACATTTTTGGACGTTTGCAATTATAACAATACATCAGCCTTCTTGTTTCTCCAATACTT GCAAATTATTAGAGCATGGCGTTTCTTAATCAAGGTTACCTTTG
CDS sequence (LotjaGi1g1v0619600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGGAGTAGGCTTTCTGGAGGATATTCTGGTAATGCAGTAGAGACGGCCAGTGAATCGGATGGGTCTGGTGTATC GGGGCGAATGGATGCTGATAGTACTGTTTTGGAGGACTCTAGTATGCCTGTGAGGAAATGTACTGGTTTGAATTCGAGCC GGCGAGATGCGTTTCGTGTTCCCGTCCAAGTTATTCCAATGTCAAATTTGTCAGAAATTAAAAGAAAAGGTCTGGTACGG CGGTTAAAATCGGAGCTTGAACAGATTAGGTTAATTCAAAAGAAAGTTGAAGTACGAAAAACTAATGGTGCTATGTTGTC ACCATCCAGTGTAATTCAGAGCTTTAGCAATGGCCATAATAATGGGCCTTGGACAGAGAACCCAAGAGAACCATCAATTT CCAATTCTGTACCAGGGAATGGATTGAAACCATCAGGCCAGAGTCAGAAGCCTCGTGGATGGAATCGTGGCTCTGCCGAG AAGTTTGCTCCTGCGGCGTGGACTTCTTCACCGAGCGCCACGAATGCTTTGTTGATGAAAGATTGTGAGCCACTGTTGAA ACGGTTGATGAATCACCAGTTTGCTTGGGTTTTCAAAACCCCCGTAGATGTGGTGAAGTTGAACCTTCCGGATTATTTCA GTGTCATTAAGCATCCTATGGATTTGGGAACAGTAAAAACCAAGCTAGCTAAAGGAGTATACAGAGATCCATTGGAATTT GCTGGTGATGTGAGGCTTACATTTTCAAATGCAATGACCTATAATCCACGTGGGAATGATGTCCATATCATGGCTGATAC CCTTAGTAAATACTTTGAAGTGAGATGGAAATCAATTGAGAAGAAACTGCCTAGAAAAGATGCTCAACGATTGCCTACAA AGCCTGCTACTTCAGATGATGTGGAAACTATTAGACCAGTGCCTCCTTCAAAAAAGAGGAAATTGATCTCATTGTCCCCT CAGCCTGAAGTTATGCCACCGGCTAAGCAGGTTATGTCAGATCAAGAGAAGCTTTGTCTAGGGAGAGAGCTGGAGTCTTT GCTAGAAGAAGAACCTGTCCATATCATTGATTTCTTAAAAGAACATTGTTCAAATGGTGGAGAATGTGCAGAGGATGAGA TTGAGATTGATATTGATGATCTCAGTAATGATACACTGTTCACATTACGAAAGCTGTTGGATGATTTTAAGCAAGAGAAG CAGAAGGACAAAGCAAAAGTTGAAGCCTGTGAAATAGAGCTGCTGAACGATTCTGGACCAAGCAATTCCTCAATGCAAGC ATTTAAAGGTAATGACTCAGCTGATGAAGAGGACATTGGTAGAAATGAGCCCCCTGTGTCTAGGTATCCTGCAGCAGAGA CTGAAAAGGATAAAACATACAAAATGGACAAACATTCAAGTCTAGGCAGCAGTGAATCTGTCAGTGACTTGAATAAACTT AAGGACGACTCTCAGCAAAAGCTAAGTTCTTTCAACTCTGATTGCTATGAAGATGGAGAATGTGCTCCAACAGAGAGACA GATCCCTGATAAACTTTATCGAGCCGCATTATTGAAGAATCGATTTGCTGATACTATCTTGAAGGCTCGAGAAAAGACAC TGGCACATGTTGAGAAGGGAGATCCTGAGAAATTGCGGCAGGAGAGGGAAAAACTGGAAATGGAGCGACGTAAAGAAAAG GCAAGGTTACAAGCAGAAGCCCAAGCAGCTGAAGATGCTCAAAAGCGGGCAGAAGCACAAGCTGCTGCCGAAGCCAGACG AAAGAGGGAGCTTGAGAGAGAAGCGGCACGGCAAGCACTGCTACAGTTGGAAAAAACTGTTGAGATCAATGAGAATTCTC GAATTCTTAAAGATTTGGAAATGCTTAGAGCTGTACCTGGTGAGCAATTGCCTAGCTCCATATATGAGACGAGTCCTGAT CAGTCTCAGGATGCCGTAGATTGTTTCACGTTTGATGGTAGTAATCCCTTGGAACAACTAGGATTGTATATTAAAGCTGA AGCTGATGATGACGAGGAAGAAGATCCACAATGTGCTCCAAATCCTTTAAGTGATGTAGAAGAGGGAGAGATTGATTAA
Protein sequence (LotjaGi1g1v0619600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARSRLSGGYSGNAVETASESDGSGVSGRMDADSTVLEDSSMPVRKCTGLNSSRRDAFRVPVQVIPMSNLSEIKRKGLVR RLKSELEQIRLIQKKVEVRKTNGAMLSPSSVIQSFSNGHNNGPWTENPREPSISNSVPGNGLKPSGQSQKPRGWNRGSAE KFAPAAWTSSPSATNALLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEF AGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQRLPTKPATSDDVETIRPVPPSKKRKLISLSP QPEVMPPAKQVMSDQEKLCLGRELESLLEEEPVHIIDFLKEHCSNGGECAEDEIEIDIDDLSNDTLFTLRKLLDDFKQEK QKDKAKVEACEIELLNDSGPSNSSMQAFKGNDSADEEDIGRNEPPVSRYPAAETEKDKTYKMDKHSSLGSSESVSDLNKL KDDSQQKLSSFNSDCYEDGECAPTERQIPDKLYRAALLKNRFADTILKAREKTLAHVEKGDPEKLRQEREKLEMERRKEK ARLQAEAQAAEDAQKRAEAQAAAEARRKRELEREAARQALLQLEKTVEINENSRILKDLEMLRAVPGEQLPSSIYETSPD QSQDAVDCFTFDGSNPLEQLGLYIKAEADDDEEEDPQCAPNPLSDVEEGEID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 48 | 48 | - | – | |
| PANTHER | 3 | 482 | 480 | 1.8E-288 | – | |
| PANTHER | 3 | 482 | 480 | 1.8E-288 | – | |
| MobiDBLite | 10 | 24 | 15 | - | – | |
| MobiDBLite | 115 | 161 | 47 | - | – | |
| MobiDBLite | 115 | 154 | 40 | - | – | |
| Gene3D | 157 | 291 | 135 | 2.8E-41 | ||
| SUPERFAMILY | 164 | 283 | 120 | 1.57E-37 | ||
| SMART | 171 | 281 | 111 | 1.3E-34 | ||
| CDD | 178 | 276 | 99 | 5.92557E-61 | ||
| Pfam | 182 | 266 | 85 | 7.5E-19 | ||
| ProSiteProfiles | 190 | 262 | 73 | 19.551 | ||
| PRINTS | 193 | 206 | 14 | 2.2E-18 | ||
| PRINTS | 209 | 225 | 17 | 2.2E-18 | ||
| PRINTS | 225 | 243 | 19 | 2.2E-18 | ||
| PRINTS | 243 | 262 | 20 | 2.2E-18 | ||
| MobiDBLite | 285 | 306 | 22 | - | – | |
| ProSiteProfiles | 322 | 404 | 83 | 16.519 | ||
| Gene3D | 327 | 404 | 78 | 1.7E-9 | ||
| Pfam | 332 | 394 | 63 | 1.7E-15 | ||
| Coils | 393 | 413 | 21 | - | – | |
| MobiDBLite | 416 | 430 | 15 | - | – | |
| MobiDBLite | 416 | 481 | 66 | - | – | |
| MobiDBLite | 450 | 465 | 16 | - | – | |
| PANTHER | 473 | 692 | 220 | 1.8E-288 | – | |
| PANTHER | 473 | 692 | 220 | 1.8E-288 | – | |
| Coils | 544 | 606 | 63 | - | – | |
| MobiDBLite | 567 | 593 | 27 | - | – | |
| MobiDBLite | 664 | 692 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0619600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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