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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR037488
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.335s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0555300.1
n.a. Hydroxyproline-rich glycoprotein family protein; TAIR: AT2G33490.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490; TrEMBL-Plants: tr|K7MVM2|K7MVM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0555300 LjG1.1_chr1 108776226 108781646 +
2 domain predictions
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LotjaGi1g1v0555300.2
n.a. Hydroxyproline-rich glycoprotein family protein; TAIR: AT2G33490.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490; TrEMBL-Plants: tr|K7MVM2|K7MVM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0555300 LjG1.1_chr1 108776553 108780332 +
2 domain predictions
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LotjaGi1g1v0629500.1
n.a. Hydroxyproline-rich glycoprotein family protein; TAIR: AT2G33490.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490; TrEMBL-Plants: tr|V7CU24|V7CU24_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0629500 LjG1.1_chr1 118077009 118084246 +
2 domain predictions
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LotjaGi1g1v0629500.2
n.a. Hydroxyproline-rich glycoprotein family protein; TAIR: AT2G33490.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490; TrEMBL-Plants: tr|A0A151SM30|A0A151SM30_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi1g1v0629500 LjG1.1_chr1 118077060 118084192 +
2 domain predictions
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LotjaGi1g1v0629500.3
n.a. Hydroxyproline-rich glycoprotein family protein; TAIR: AT2G33490.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490; TrEMBL-Plants: tr|A0A0L9U6Q1|A0A0L9U6Q1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0629500 LjG1.1_chr1 118077060 118084192 +
2 domain predictions
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