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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR037546
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.808s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0139300.1
n.a. Transcription factor; TAIR: AT5G50010.1 transcription factor bHLH145; Swiss-Prot: sp|Q9FGB0|BH145_ARATH Transcription factor bHLH145; TrEMBL-Plants: tr|A0A1J7GUP8|A0A1J7GUP8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0139300 LjG1.1_chr1 22826420 22831187 +
2 domain predictions
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LotjaGi1g1v0348900.1
n.a. Transcription factor; TAIR: AT5G50010.1 transcription factor bHLH145; Swiss-Prot: sp|Q9FGB0|BH145_ARATH Transcription factor bHLH145; TrEMBL-Plants: tr|A0A151TSS4|A0A151TSS4_CAJCA Transcription factor bHLH145 family; Found in the gene: LotjaGi1g1v0348900 LjG1.1_chr1 81797181 81801292 +
2 domain predictions
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LotjaGi4g1v0024300.1
n.a. basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT1G29950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9ASX9|BH144_ARATH Transcription factor bHLH144; TrEMBL-Plants: tr|T2DNS4|T2DNS4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0024300 LjG1.1_chr4 2967202 2971352 +
2 domain predictions
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LotjaGi4g1v0024300.2
n.a. basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT1G29950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9ASX9|BH144_ARATH Transcription factor bHLH144; TrEMBL-Plants: tr|T2DNS4|T2DNS4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0024300 LjG1.1_chr4 2967353 2971346 +
2 domain predictions
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LotjaGi4g1v0038700.1
n.a. Transcription factor; TAIR: AT5G09460.1 transcription factor bHLH143; Swiss-Prot: sp|Q9FY69|BH143_ARATH Transcription factor bHLH143; TrEMBL-Plants: tr|K7L5B8|K7L5B8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0038700 LjG1.1_chr4 4625696 4630145 -
2 domain predictions
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LotjaGi4g1v0038700.2
n.a. Transcription factor; TAIR: AT5G09460.1 transcription factor bHLH143; Swiss-Prot: sp|Q9FY69|BH143_ARATH Transcription factor bHLH143; TrEMBL-Plants: tr|K7L5B8|K7L5B8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0038700 LjG1.1_chr4 4625726 4629831 -
2 domain predictions
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LotjaGi6g1v0350100.1
n.a. Transcription factor; TAIR: AT5G64340.1 transcription factor SAC51; Swiss-Prot: sp|Q9FMF4|SAC51_ARATH Transcription factor SAC51; TrEMBL-Plants: tr|G7IPM5|G7IPM5_MEDTR Transcription factor; Found in the gene: LotjaGi6g1v0350100 LjG1.1_chr6 66234976 66238403 +
2 domain predictions
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