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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039276
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.580s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0126100_LC.1
n.a. Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126100_LC LjG1.1_chr1 19952036 19984209 +
2 domain predictions
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LotjaGi1g1v0126200_LC.1
n.a. Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126200_LC LjG1.1_chr1 20010683 20014297 +
2 domain predictions
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LotjaGi1g1v0126400_LC.1
n.a. Protein SAWADEE HOMEODOMAIN-like protein 1; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126400_LC LjG1.1_chr1 20084248 20085171 -
2 domain predictions
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LotjaGi1g1v0126600_LC.1
n.a. Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC LjG1.1_chr1 20151433 20155089 -
2 domain predictions
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LotjaGi1g1v0126600_LC.2
n.a. Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC LjG1.1_chr1 20151433 20193554 -
2 domain predictions
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LotjaGi1g1v0126600_LC.3
n.a. Protein sawadee homeodomain-like 1; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I1KGJ4|I1KGJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC LjG1.1_chr1 20191365 20193554 -
2 domain predictions
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LotjaGi1g1v0408600.1
n.a. Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3T1R4|I3T1R4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0408600 LjG1.1_chr1 89850395 89854987 -
2 domain predictions
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LotjaGi3g1v0044200.1
n.a. DNA-BINDING TRANSCRIPTION FACTOR 2; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|G7LDQ2|G7LDQ2_MEDTR Sequence-specific DNA-binding transcription factor; Found in the gene: LotjaGi3g1v0044200 LjG1.1_chr3 4708251 4715311 +
2 domain predictions
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LotjaGi3g1v0044300.1
n.a. Protein sawadee homeodomain-like 2; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|A0A0B2PMB5|A0A0B2PMB5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0044300 LjG1.1_chr3 4717139 4727063 +
2 domain predictions
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LotjaGi3g1v0183600_LC.1
n.a. Protein sawadee homeodomain-like 2; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0183600_LC LjG1.1_chr3 25735400 25738590 -
2 domain predictions
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LotjaGi3g1v0183600_LC.2
n.a. Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0183600_LC LjG1.1_chr3 25735400 25738590 -
2 domain predictions
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LotjaGi3g1v0370500_LC.1
n.a. Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370500_LC LjG1.1_chr3 75926283 75934865 -
2 domain predictions
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LotjaGi3g1v0370500_LC.2
n.a. Protein sawadee homeodomain-like 1; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370500_LC LjG1.1_chr3 75926283 75934865 -
2 domain predictions
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LotjaGi3g1v0370700_LC.1
n.a. Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370700_LC LjG1.1_chr3 75974190 75978758 -
2 domain predictions
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LotjaGi6g1v0038600.1
n.a. Protein SAWADEE HOMEODOMAIN-like protein 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|A0A151SH36|A0A151SH36_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0038600 LjG1.1_chr6 7528787 7533478 +
2 domain predictions
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