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IPR039276

Source: InterPro

Description

IPR039276 is a Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2.

<p>This entry includes SAWADEE HOMEODOMAIN HOMOLOGS 1 and 2 (SHH1 and SHH2) from plants. In Arabidopsis, SHH1 is a homeodomain protein required for DNA methylation and for the accumulation of siRNAs at specific loci [[cite:PUB00089390]]. It interacts with Pol-IV and acts upstream in the RdDM (RNA-directed DNA methylation) pathway. Its SAWADEE domain is a chromatin-binding module that functions as a dual lysine reader, probing for both unmethylated K4 and methylated K9 modifications on the histone 3 (H3) tail [[cite:PUB00067066]]. The function of SHH2 is not clear.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0126100_LC.1
– Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126100_LC
Domains
10
LotjaGi1g1v0126200_LC.1
– Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126200_LC
Domains
7
LotjaGi1g1v0126400_LC.1
– Protein SAWADEE HOMEODOMAIN-like protein 1; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126400_LC
Domains
7
LotjaGi1g1v0126600_LC.1
– Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC
Domains
10
LotjaGi1g1v0126600_LC.2
– Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC
Domains
10
LotjaGi1g1v0126600_LC.3
– Protein sawadee homeodomain-like 1; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I1KGJ4|I1KGJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC
Domains
8
LotjaGi1g1v0408600.1
– Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3T1R4|I3T1R4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0408600
Domains
10
LotjaGi3g1v0044200.1
– DNA-BINDING TRANSCRIPTION FACTOR 2; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|G7LDQ2|G7LDQ2_MEDTR Sequence-specific DNA-binding transcription factor; Found in the gene: LotjaGi3g1v0044200
Domains
17
LotjaGi3g1v0044300.1
– Protein sawadee homeodomain-like 2; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|A0A0B2PMB5|A0A0B2PMB5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0044300
Domains
12
LotjaGi3g1v0183600_LC.1
– Protein sawadee homeodomain-like 2; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0183600_LC
Domains
7
LotjaGi3g1v0183600_LC.2
– Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0183600_LC
Domains
8
LotjaGi3g1v0370500_LC.1
– Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370500_LC
Domains
8
LotjaGi3g1v0370500_LC.2
– Protein sawadee homeodomain-like 1; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370500_LC
Domains
11
LotjaGi3g1v0370700_LC.1
– Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370700_LC
Domains
8
LotjaGi6g1v0038600.1
– Protein SAWADEE HOMEODOMAIN-like protein 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|A0A151SH36|A0A151SH36_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0038600
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00086 CDD 1 6.67