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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040182
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.352s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0128300.1
n.a. Autophagy-related protein 13; TAIR: AT3G49590.1 Autophagy-related protein 13; Swiss-Prot: sp|Q9SCK0|AT13A_ARATH Autophagy-related protein 13a; TrEMBL-Plants: tr|A0A0B2RZV3|A0A0B2RZV3_GLYSO Autophagy-related protein 13; Found in the gene: LotjaGi1g1v0128300 LjG1.1_chr1 20480249 20485750 +
2 domain predictions
1 GO term
LotjaGi1g1v0128300.2
n.a. Autophagy-related protein 13; TAIR: AT3G49590.1 Autophagy-related protein 13; Swiss-Prot: sp|Q9SCK0|AT13A_ARATH Autophagy-related protein 13a; TrEMBL-Plants: tr|A0A0B2RZV3|A0A0B2RZV3_GLYSO Autophagy-related protein 13; Found in the gene: LotjaGi1g1v0128300 LjG1.1_chr1 20481190 20484972 +
2 domain predictions
1 GO term
LotjaGi1g1v0316300.1
n.a. Autophagy-related protein 13; TAIR: AT3G18770.1 Autophagy-related protein 13; Swiss-Prot: sp|F4J8V5|AT13B_ARATH Autophagy-related protein 13b; TrEMBL-Plants: tr|A0A1J7IGP6|A0A1J7IGP6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0316300 LjG1.1_chr1 76264451 76270153 -
2 domain predictions
1 GO term
LotjaGi4g1v0407500.1
n.a. Autophagy-related protein 13; TAIR: AT3G18770.1 Autophagy-related protein 13; Swiss-Prot: sp|F4J8V5|AT13B_ARATH Autophagy-related protein 13b; TrEMBL-Plants: tr|G7LD52|G7LD52_MEDTR Autophagy-related protein; Found in the gene: LotjaGi4g1v0407500 LjG1.1_chr4 78362186 78366784 +
2 domain predictions
1 GO term