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IPR040182 is a Autophagy-related protein 13.
<p>This entry represents autophagy-related protein 13 (Atg13) from yeasts, animals and plants, which functions in autophagy.</p> <p>Fission yeast autophagy initiation is controlled by the Atg1 kinase complex, which is composed of the Ser/Thr kinase Atg1, the adaptor protein Atg13, and the ternary complex of Atg17-Atg31-Atg29. Atg13 recruits Atg1 to the site of autophagosome formation and enhancing Atg1 kinase activity. Atg13 may have additional functions that are independent of a direct interaction or permanent colocalization with Atg1 [[cite:PUB00076865]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Autophagosome assembly | The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Autophagy-related protein 13; TAIR: AT3G49590.1 Autophagy-related protein 13; Swiss-Prot: sp|Q9SCK0|AT13A_ARATH Autophagy-related protein 13a; TrEMBL-Plants: tr|A0A0B2RZV3|A0A0B2RZV3_GLYSO Autophagy-related protein 13; Found in the gene: LotjaGi1g1v0128300 | 8 | ||
| – | Autophagy-related protein 13; TAIR: AT3G49590.1 Autophagy-related protein 13; Swiss-Prot: sp|Q9SCK0|AT13A_ARATH Autophagy-related protein 13a; TrEMBL-Plants: tr|A0A0B2RZV3|A0A0B2RZV3_GLYSO Autophagy-related protein 13; Found in the gene: LotjaGi1g1v0128300 | 8 | ||
| – | Autophagy-related protein 13; TAIR: AT3G18770.1 Autophagy-related protein 13; Swiss-Prot: sp|F4J8V5|AT13B_ARATH Autophagy-related protein 13b; TrEMBL-Plants: tr|A0A1J7IGP6|A0A1J7IGP6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0316300 | 8 | ||
| – | Autophagy-related protein 13; TAIR: AT3G18770.1 Autophagy-related protein 13; Swiss-Prot: sp|F4J8V5|AT13B_ARATH Autophagy-related protein 13b; TrEMBL-Plants: tr|G7LD52|G7LD52_MEDTR Autophagy-related protein; Found in the gene: LotjaGi4g1v0407500 | 6 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 25.00 |