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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040724
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.714s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0456000.1
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000 LjG1.1_chr2 94904416 94910155 +
2 domain predictions
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LotjaGi2g1v0456000.2
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|G7JG63|G7JG63_MEDTR Phenylalanyl-tRNA synthetase alpha chain, putative; Found in the gene: LotjaGi2g1v0456000 LjG1.1_chr2 94904683 94906663 +
2 domain predictions
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LotjaGi2g1v0456000.3
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000 LjG1.1_chr2 94904683 94909574 +
2 domain predictions
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LotjaGi3g1v0508200.1
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200 LjG1.1_chr3 92504217 92515118 +
2 domain predictions
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LotjaGi3g1v0508200.2
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200 LjG1.1_chr3 92504517 92510389 +
2 domain predictions
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