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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PF05637
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.019s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0243509.1
n.a. PREDICTED: galactomannan galactosyltransferase 1-like [Cucumis sativus] gi|449448200|ref|XP_004141854.1| chr0 126323749 126324519 +
2 domain predictions
2 GO terms
Lj0g3v0312359.1
n.a. Galactosyl transferase GMA12/MNN10 family protein [Theobroma cacao] gi|508774678|gb|EOY21934.1| chr0 163044300 163046509 +
2 domain predictions
2 GO terms
Lj1g3v4899040.1
n.a. PREDICTED: xyloglucan 6-xylosyltransferase-like [Glycine max] gi|356572726|ref|XP_003554517.1| chr1 59404906 59408517 +
2 domain predictions
2 GO terms
Lj2g3v0039060.1
n.a. Xyloglucan 6-xylosyltransferase [Medicago truncatula] gi|357478773|ref|XP_003609672.1| chr2 701711 703780 +
2 domain predictions
2 GO terms
Lj2g3v1979590.1
n.a. PREDICTED: galactomannan galactosyltransferase 1-like isoform 1 [Glycine max] gi|356541602|ref|XP_003539263.1| chr2 28746588 28754801 -
2 domain predictions
2 GO terms
Lj2g3v1979600.1
n.a. n.a. chr2 28752375 28754403 +
2 domain predictions
2 GO terms
Lj4g3v0743840.1
n.a. Galactomannan galactosyltransferase [Medicago truncatula] gi|357476509|ref|XP_003608540.1| chr4 11756379 11757164 -
2 domain predictions
2 GO terms
Lj4g3v1658900.1
n.a. Galactosyl transferase GMA12/MNN10 family protein [Theobroma cacao] gi|508774678|gb|EOY21934.1| chr4 24253544 24255592 +
2 domain predictions
2 GO terms
Lj4g3v2315770.1
n.a. Xyloglucan 6-xylosyltransferase [Medicago truncatula] gi|357478773|ref|XP_003609672.1| chr4 32330341 32332277 -
2 domain predictions
2 GO terms
Lj6g3v1444600.1
n.a. Xyloglucan 6-xylosyltransferase [Medicago truncatula] gi|357478773|ref|XP_003609672.1| chr6 17018830 17021129 +
2 domain predictions
2 GO terms
LotjaGi1g1v0194500.1
n.a. Xyloglucan 6-xylosyltransferase 1; TAIR: AT5G07720.1 Galactosyl transferase GMA12/MNN10 family protein; Swiss-Prot: sp|Q9LF80|XXT3_ARATH Probable xyloglucan 6-xylosyltransferase 3; TrEMBL-Plants: tr|A0A151SL58|A0A151SL58_CAJCA Putative glycosyltransferase 3; Found in the gene: LotjaGi1g1v0194500 LjG1.1_chr1 38608853 38612917 -
2 domain predictions
2 GO terms
LotjaGi1g1v0766100.1
n.a. Xyloglucan 6-xylosyltransferase 1; TAIR: AT4G02500.1 UDP-xylosyltransferase 2; Swiss-Prot: sp|O22775|XXT2_ARATH Xyloglucan 6-xylosyltransferase 2; TrEMBL-Plants: tr|A0A072U4W6|A0A072U4W6_MEDTR Xyloglucan xylosyltransferase; Found in the gene: LotjaGi1g1v0766100 LjG1.1_chr1 133919812 133923937 +
2 domain predictions
2 GO terms
LotjaGi1g1v0766100.2
n.a. Xyloglucan 6-xylosyltransferase 1; TAIR: AT4G02500.1 UDP-xylosyltransferase 2; Swiss-Prot: sp|O22775|XXT2_ARATH Xyloglucan 6-xylosyltransferase 2; TrEMBL-Plants: tr|A0A072U4W6|A0A072U4W6_MEDTR Xyloglucan xylosyltransferase; Found in the gene: LotjaGi1g1v0766100 LjG1.1_chr1 133920034 133921389 +
2 domain predictions
2 GO terms
LotjaGi2g1v0410800.1
n.a. Xyloglucan alpha-1,6-xylosyltransferase; TAIR: AT2G22900.1 Galactosyl transferase GMA12/MNN10 family protein; Swiss-Prot: sp|Q564G7|GMGT1_CYATE Galactomannan galactosyltransferase 1; TrEMBL-Plants: tr|I1LH49|I1LH49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0410800 LjG1.1_chr2 90755748 90760265 +
2 domain predictions
2 GO terms
LotjaGi4g1v0093700.1
n.a. Xyloglucan alpha-1,6-xylosyltransferase; TAIR: AT4G37690.1 Galactosyl transferase GMA12/MNN10 family protein; Swiss-Prot: sp|Q564G7|GMGT1_CYATE Galactomannan galactosyltransferase 1; TrEMBL-Plants: tr|Q7X9N4|Q7X9N4_LOTJA Galactomannan galactosyltransferase; Found in the gene: LotjaGi4g1v0093700 LjG1.1_chr4 12595748 12597736 -
2 domain predictions
2 GO terms
LotjaGi4g1v0093800.1
n.a. Xyloglucan 6-xylosyltransferase 1; TAIR: AT4G37690.1 Galactosyl transferase GMA12/MNN10 family protein; Swiss-Prot: sp|Q9SZG1|GT6_ARATH Glycosyltransferase 6; TrEMBL-Plants: tr|G7JF68|G7JF68_MEDTR Galactosyl transferase GMA12/MNN10 family protein; Found in the gene: LotjaGi4g1v0093800 LjG1.1_chr4 12600772 12602669 -
2 domain predictions
2 GO terms
LotjaGi4g1v0251100.1
n.a. Xyloglucan 6-xylosyltransferase 1; TAIR: AT5G07720.1 Galactosyl transferase GMA12/MNN10 family protein; Swiss-Prot: sp|Q9LF80|XXT3_ARATH Probable xyloglucan 6-xylosyltransferase 3; TrEMBL-Plants: tr|Q5TIM8|Q5TIM8_LOTJA Putative glycosyltransferase; Found in the gene: LotjaGi4g1v0251100 LjG1.1_chr4 60474210 60476417 +
2 domain predictions
2 GO terms
LotjaGi4g1v0341600.1
n.a. Xyloglucan 6-xylosyltransferase 1; TAIR: AT3G62720.1 xylosyltransferase 1; Swiss-Prot: sp|Q9LZJ3|XXT1_ARATH Xyloglucan 6-xylosyltransferase 1; TrEMBL-Plants: tr|G7JLH4|G7JLH4_MEDTR Xyloglucan xylosyltransferase; Found in the gene: LotjaGi4g1v0341600 LjG1.1_chr4 72134809 72136965 -
2 domain predictions
2 GO terms
LotjaGi6g1v0249700.1
n.a. Xyloglucan 6-xylosyltransferase 1; TAIR: AT3G62720.1 xylosyltransferase 1; Swiss-Prot: sp|Q9LZJ3|XXT1_ARATH Xyloglucan 6-xylosyltransferase 1; TrEMBL-Plants: tr|V7B015|V7B015_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0249700 LjG1.1_chr6 56139235 56142036 +
2 domain predictions
2 GO terms