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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0410800 |
| Transcript ID | LotjaGi2g1v0410800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Xyloglucan alpha-1,6-xylosyltransferase; TAIR: AT2G22900.1 Galactosyl transferase GMA12/MNN10 family protein; Swiss-Prot: sp|Q564G7|GMGT1_CYATE Galactomannan galactosyltransferase 1; TrEMBL-Plants: tr|I1LH49|I1LH49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0410800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90755748..90760265) extracted from Lotus japonicus Gifu genome v1.2.
GCATCATTGGAAAAAAATAATTAATATAATTCAAACTTTCATTTGGTTCTTATAAAAAGGACCAAGATTTTTCTTCTCTT TCATGCTTATAAATAAGACCGGAGGGAGTAGTAGTACATGATTTCATGCATGTTGAATTGAAGGTCTAAGGTGCAAATCA AATATACCCTCAATCTTTTCTTCAAGATAGTACATTCAATCACCGGATCCTATTCACCAAATTGGTATTAGACTATTAGC TTCTAGCTAGTGTGTCGTAATTTCATTTTCAAGTTGCCCCTTCCCTTCTTCTCCTCCATCCATATCTATCCATCACCATC ATCACTCATCAGCACTTGATCAAAACAGAGCAAAGAATATTAACACTTTACTACCCTTGAATGACGAGAGAAACACTTAA TCAATGTTTTGTCGTTACCCTATTCTTTTTCACCCACATCTTTTTCCCTGTTCACGCTCTCTTTATATCAACCACATTGC GTCTCAAGAATAGATACGCACCCAACACATAGCACCATTTTTACACTCCCTCTCTCCCTCGTTTCAGAAGCGTGTTACTT TTTCCATTCCAGTTCACAGTTCATTGTCACAACCTCTGCTAATTTGAATCTTAGCGAAGTCACCCACACATTACGACGAG TGTCACCACCACCACCACCGCCACCTTACTACCACTACGTCACCCTGTAACAACCAATTAACCCTTCCACTTCCTTCCAA TTTCCACCACCGCTATTCATCACTTTACTTTCCTTAAAAATGGTTGCATCCTCTGAACTCCCTCACCATCACCAAACCAC TCTCATGGCAAAATCCACTTCCAGAAATGGTAACACTAAACCCACCTCCTCTACCTGCCTCTTCCTCGGAGGAGCATTCT CCGCTCTCCTCCTCGTCTGGGGGCTTTCCTCCGTCACAACCCCCATTCCCAACCAAAACAACCTCAATCTCACCCCTACC GAAAACAACGCCGTCCCCACAAACCCCACTCCCGATCTCCGCTTCGACCCGCCGGACCGGACCTTCTACGACGACCCGCA AATCGGTTACACCATGGACAACAAGGTAAAAAACTGGGATCAAAAGCGCCAGGACTGGCTGAGAAAACACCCTTCCTTCC TCGCCGGAGCGAAAGACCGGGTCCTCATGGTCACCGGATCGCAACCGTCACCGTGCCGAAACCCCGTCGGCGACCACTTT CTTCTACGATTCTTCAAGAACAAAGTGGACTACTGCAGAATCCACGGCTTGGAAATCTTCTACAACAACGCCCTCCTCCA CCCTCAGATGTTTGCATACTGGGCAAAATACCCGGTGATGCGCTCCGCCATGATGGCCCACCCGGAAGCCGAGTGGATTT GGTGGGTCGACTCAGACGCACTGTTCACCGACATGGAGTTCACTCTCCCCCTCCACCGCTACAACAACCACAACCTCGTC GTCCACGGCTGGCCGCAGCTCATCCACGAGAAGCGGAGCTGGACGGGGCTCAACGCCGGCGTGTTCCTCATCAGAAACTG TCAGTGGTCGTTGGATTTCATGGACGTGTGGGCCAGCATGGGCCCACAAACTCCAAACTACAACAAATGGGGTCAAATTT TACGGTCAACGTTTAAGGATAAATTCTTCCCGGAGTCAGATGATCAGACGGGTCTCGCTTACTTGATCGCGATGGAGAAG GAGAAATGGGCGGACAGGATTTATCTAGAATCTGAATACTATTTCGAAGGTTACTGGGAAGAAATCGTAGGTCAGCTTGA GAATATTACGAAACGCTACGATGCGCTTGAGAGGAGGGTGCGTAGGTTAAGGCGGCGTCATGCTGAGAAAGTGAGTGAGA GTTATGGTCAGGTGCGGGAGGAGTATTTGAAGGATGGTGGGTTCGGTAAAGGGAGTTTGAGGAGACCGTTTATTACGCAT TTTACCGGTTGTCAACCGTGTAGTGGGAAGTATAATGAGATGTATACTGCTGATGATTGCTGGAATGGGATGAAGAAAGC GTTGAATTTTGCTGATAATCAGGTGATGCGTAAATATGGTTTCGTGCACACGGATTTACTGGATAATAAGGATGTTTCTG CTGTACCTTTTGATTATCCCCAAACTGATGACCTGACTCTTCACTCAGGTAACAACAGATTAAATTAATCAAATCAATAT CATATGATATGAAATGTGGGATCCATATCCAATTATCTTGGCCAATGTCCACTCAGATTCTGTATGTTGTTGTTATAGTG AAGTTTTAGTGTTATTATAATATTGCATTACACTATAGTATTAGTATATTGTACTGTGTACTTTATTCCATTCTGGCATC TTGCTCTTACTTAGGGAAGGGTTTTTGGTCAGACTTTTAGTAAAGGATTTTGGCAAATACTTTCATTAAATATTAATTTA AGAGCATTGCACAAACGGACGGATAATTATATTCTTCTCGAATCCCTATAGAACACACAATGTTGGTGGGTGGGTAATCA TTTCCTCTTTGACTCGTTTTTGTCTTAATCGCAAGTATTAAAGTGAATACACACCTTATGCGTTCAATTGTGGGTAATCA TTCCTCTTTTACTCCTTAAACGGTTATACTCCCTCCGGTCCTATTTATAAGCAATAAAAAAAAATTCACATAATTTAAAA AATGTAGTAAAACTAGATAAAATGCATTAAATTTGTCTTAAATCAAAATAAACTTCCAAAATTACCCTTTGTTATTCATG TTGGAAAGTGGGAAAGAGAGAGAATAATTAATGAGACACATTCTACAAGTTAGAATTAATAAGGACATCATTGGAAAAAA AATAATTAATATAATTCAAACTTTCATTTAGTTCTTATAAAAAGGACCAAGATTTTTCTTCTCTTTCATGCTTATAAATA GGACCGGAAGGAGTACCATTGTTTTAACTTTTAATTAATTTACACTACTATTTTTCTTTCATTTCAATTTTATTTTACTT CTTCACATCACCTTAACACTTAAACGTGAATACCAATAAAATTATGCAATTTTGAAGCTAGCAGGTAAAGAGTGTTTCCA GAGTGCTTAGAGTCCCAAATTTAGGAGAATAATTTTAAATTATTTTCATCAATTTTTAAAATACAGTATGTTTTAATTAT TAAATTAAATAAATAATTTTTTTGAAATTATATTCTTAACATACTGAGTACATTACTTTCTTGTTTAACATTTTTTACCA AGTAGTAAAACAAATATTGAGATGACGTTTTAGATCAATAACTTCAACCAAATTTTAGAAAAATACTTCCAGTATTCTGT TTTTTAATCTTGACCTGACCAATATTTTCCTTAACAAAAATTACTTAATATTTTTATTATAAGAAAGAAGATGGAATGAC AGAAATTTGTCCTAACATTATTTTGGTAATCACTTGCACGGAAGCTTTAACTGGAAAGCATGTGTGTAAGTAAAGGATTC AGCGGTACAATGATAGCAAAAATGAATGAAAATGTTACTAATAAAGACGAATAGCTAGCAACCGGTGAACATATGAAAGA AATGTGGTTTATGTGAGGTCACAATATAAAGGTAGGAATGTGTACCAAGTTATAGTTATCCATTGTCGCTCAACCACCAT GATTTCCAAATAATTAGAATCTACCTCATAACAATGTTTGTCAAACAAGCAGGGGAAGATTAATAAACCCCTCATAAGCA CACACAGTGCATTAAAATAAAACAACCACAATGCATAAGTTTTTTTTTACATTACCACATGTATACTCTATTGAGCTAAT CTTATTGGACTCGAGTGCGGTAAAAACTAAAAGTCTCTTCAATAATACGTTTCATAAGGATCGACATTTTAACCATAGGG GTTCAAACAGTTACTATTAACTCTTGGGACGGACACTCACGAGTCTACAATAGTACATAAATTTCTTGCTCACTAAATAG ACGAATTTGCTTGTGGGGTACTGCCTATTTCTCTAGCCATGGCTTCTGAACTCGTTAGTTGGGGAAGCATTTTCTTGTGG ATCTTATAAATGTCACATTTTGGACCTGCAGTGTGAAGGACCCACTGAGGCCTAGGTTGGGGAAACTTTACAGTGGCCCA TTAATTAAGATTGGCAGATGAAGCATGTGCATCCATCCAAAAGTAATCATCGGCCCGTATTATTTGTCGGGGGTTGTGCG CACAAGTTATCAAAACTGTATGTATGTCAATACTCATGCATATGTTTGGATACTCAGTAAATTTTCATGTTTCAAAGAGA ATAGATTATAGGAGAAACTACTTTTTGTCTTAGTAGCTTTTGTGGTAGTAGGATTCATTCTGGAAGGCATGAATATGAAT CCAAACACGCTATTGGTCACTATACCCACAGTGAGGCTTACATGAGGCAGTTTGGCGAGTCCTATTATATCCACCTGTTG CCTGTTTTTCCCATTTCCTTTCATTGCTGGAAATGTTAGATGCATAGCAGAATAGAAGTTTTAATCTAGAGGATATTGCT ATATCAAATTTTTGGTGTATCCAAGATCAAGATAGCTC
CDS sequence (LotjaGi2g1v0410800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGCATCCTCTGAACTCCCTCACCATCACCAAACCACTCTCATGGCAAAATCCACTTCCAGAAATGGTAACACTAA ACCCACCTCCTCTACCTGCCTCTTCCTCGGAGGAGCATTCTCCGCTCTCCTCCTCGTCTGGGGGCTTTCCTCCGTCACAA CCCCCATTCCCAACCAAAACAACCTCAATCTCACCCCTACCGAAAACAACGCCGTCCCCACAAACCCCACTCCCGATCTC CGCTTCGACCCGCCGGACCGGACCTTCTACGACGACCCGCAAATCGGTTACACCATGGACAACAAGGTAAAAAACTGGGA TCAAAAGCGCCAGGACTGGCTGAGAAAACACCCTTCCTTCCTCGCCGGAGCGAAAGACCGGGTCCTCATGGTCACCGGAT CGCAACCGTCACCGTGCCGAAACCCCGTCGGCGACCACTTTCTTCTACGATTCTTCAAGAACAAAGTGGACTACTGCAGA ATCCACGGCTTGGAAATCTTCTACAACAACGCCCTCCTCCACCCTCAGATGTTTGCATACTGGGCAAAATACCCGGTGAT GCGCTCCGCCATGATGGCCCACCCGGAAGCCGAGTGGATTTGGTGGGTCGACTCAGACGCACTGTTCACCGACATGGAGT TCACTCTCCCCCTCCACCGCTACAACAACCACAACCTCGTCGTCCACGGCTGGCCGCAGCTCATCCACGAGAAGCGGAGC TGGACGGGGCTCAACGCCGGCGTGTTCCTCATCAGAAACTGTCAGTGGTCGTTGGATTTCATGGACGTGTGGGCCAGCAT GGGCCCACAAACTCCAAACTACAACAAATGGGGTCAAATTTTACGGTCAACGTTTAAGGATAAATTCTTCCCGGAGTCAG ATGATCAGACGGGTCTCGCTTACTTGATCGCGATGGAGAAGGAGAAATGGGCGGACAGGATTTATCTAGAATCTGAATAC TATTTCGAAGGTTACTGGGAAGAAATCGTAGGTCAGCTTGAGAATATTACGAAACGCTACGATGCGCTTGAGAGGAGGGT GCGTAGGTTAAGGCGGCGTCATGCTGAGAAAGTGAGTGAGAGTTATGGTCAGGTGCGGGAGGAGTATTTGAAGGATGGTG GGTTCGGTAAAGGGAGTTTGAGGAGACCGTTTATTACGCATTTTACCGGTTGTCAACCGTGTAGTGGGAAGTATAATGAG ATGTATACTGCTGATGATTGCTGGAATGGGATGAAGAAAGCGTTGAATTTTGCTGATAATCAGGTGATGCGTAAATATGG TTTCGTGCACACGGATTTACTGGATAATAAGGATGTTTCTGCTGTACCTTTTGATTATCCCCAAACTGATGACCTGACTC TTCACTCAGTGTGA
Protein sequence (LotjaGi2g1v0410800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVASSELPHHHQTTLMAKSTSRNGNTKPTSSTCLFLGGAFSALLLVWGLSSVTTPIPNQNNLNLTPTENNAVPTNPTPDL RFDPPDRTFYDDPQIGYTMDNKVKNWDQKRQDWLRKHPSFLAGAKDRVLMVTGSQPSPCRNPVGDHFLLRFFKNKVDYCR IHGLEIFYNNALLHPQMFAYWAKYPVMRSAMMAHPEAEWIWWVDSDALFTDMEFTLPLHRYNNHNLVVHGWPQLIHEKRS WTGLNAGVFLIRNCQWSLDFMDVWASMGPQTPNYNKWGQILRSTFKDKFFPESDDQTGLAYLIAMEKEKWADRIYLESEY YFEGYWEEIVGQLENITKRYDALERRVRRLRRRHAEKVSESYGQVREEYLKDGGFGKGSLRRPFITHFTGCQPCSGKYNE MYTADDCWNGMKKALNFADNQVMRKYGFVHTDLLDNKDVSAVPFDYPQTDDLTLHSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| MobiDBLite | 7 | 27 | 21 | - | – | |
| PANTHER | 10 | 448 | 439 | 9.6E-218 | – | |
| PANTHER | 10 | 448 | 439 | 9.6E-218 | – | |
| Phobius | 32 | 50 | 19 | - | – | |
| Phobius | 51 | 457 | 407 | - | – | |
| MobiDBLite | 60 | 76 | 17 | - | – | |
| MobiDBLite | 60 | 85 | 26 | - | – | |
| Pfam | 125 | 396 | 272 | 2.0E-69 | ||
| Gene3D | 145 | 288 | 144 | 9.3E-17 | ||
| Coils | 333 | 360 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi2g1v0410800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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