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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0766100 |
| Transcript ID | LotjaGi1g1v0766100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Xyloglucan 6-xylosyltransferase 1; TAIR: AT4G02500.1 UDP-xylosyltransferase 2; Swiss-Prot: sp|O22775|XXT2_ARATH Xyloglucan 6-xylosyltransferase 2; TrEMBL-Plants: tr|A0A072U4W6|A0A072U4W6_MEDTR Xyloglucan xylosyltransferase; Found in the gene: LotjaGi1g1v0766100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133919812..133923937) extracted from Lotus japonicus Gifu genome v1.2.
AGTTGTTCCGTCAAAGAGGCTCTGCTGTCTTTAGATAAAGCTTGTCTAGTTTTGGCTTTCTCTTGAAGACAAAAAAAAAA AAACACGTTTCTGCATTCGCCGACAAAACAATTACGATAATCATGTCCTAAAATTAGTCTTGTGTTTCTGTGTTTCCCCA TCGCTCTCATTTTCCATCCTCCAATTTTCTCCTCTTACGCCTTCAATTCGCAGTTCTTTACAATGTTAGACAAGTGTTTG GGTTCTCAAAAGGCAAGAAGATTCCAGAGATTTCTCAGCCAGTGCAAGGTCACAATCCTCTGTTTTTTCCTCACCATTGT TGTCCTGCGCGGCACCATCGGCGCCGGAAAATTCGGAACGCCGGAGCAGGACTTCGTCGACCTTCGTAACCGCTTATCCT CCCGGAAGCTTGCCGAGCCTCATCGTGTTCTCGGTGAGCTTCATTCCACCACCAATTACAACGCCTTCGACATCAACACC ATATTGGTCGATGAAGAAGAAGAAGGAGAAAAGGACCCTGAGAAACGGAACCCTCACGAGCCTTATCGTCTTGGACCCAA AATCTCCAATTGGGATGAACAGAGATCGAAGTGGCTTCGTGAAAACCCTAATTACCCGAATTTCATTCGACCCGGCAAGC CTCGGGTTCTTCTGGTAACTGGGTCGTCGCCGAAACCGTGTGAGAATCCTGTTGGGGATCATTACTTGTTGAAGTCTATT AAGAACAAGATTGATTATTGTCGCTTGCATGGTATTGATGTGTTCTACAACATGGCTCTGTTTGATGCTGAAATGGCAGG GTTCTGGGCGAAGCTTCCTTTGATTCGGAAGCTTCTTTTGTCTCATCCTGAAGTGGAGTTTCTGTGGTGGATGGATAGTG ATGCCATGTTCACTGACATGGCATTTGAAGTGCCGTGGGAGAGGTATAAGAACTCTAACTTGGTGATGCATGGTTGGAAA GAGATGGTGTATGACCAGAAGGATTGGATTGGGTTGAACACTGGGAGCTTTCTGTTGAGGAACTGCCAATGGTCTTTGGA TATTCTTGATGCCTGGGCGCCAATGGGGCCAAAAGGGAAAATCAGGGATGAGGCTGGGAAATTGCTGACAAAGGAGCTGA AAGACAGGCCTATTTTTGAAGCTGATGATCAATCAGCGATGGTTTATTTGCTGGCGAAAAAGAGGGACTTGTGGGGTGAT AAGGTTTATCTTGAGAATGGTTATTACTTGCATGGTTACTGGGGTATTCTGGTTGATAAGTATGAGGAGATGATTGAGAA TTACCACCCTGGTTTTGGGGATCATAGGTGGCCGTTGGTCACTCATTTTGTGGGTTGTAAGCCTTGTGGGAAGTTTGGGG ATTACCCTGTTGAGAGATGCTTGAAGCAGATGGATAGGGCTTTCAATTTTGGAGATAACCAGATACTGCAGATTTATGGG TTCACTCACAAGTCTTTGGGTAGTAGGAGGGTTAAGAGAATACGGAATGAGAGTAGCAATCCTCTTGAGGTCAAAGATGA ACTTGGCTTGCTTCATCCAGCATTTAAAGCAGTTCATGTATCATCATCATCTAGCTGAGACTCCTATCTTTTTGTTGTGG TTGAAAAGTCAGAAAACTCGTCAGGTCTAGGTATTTTGTTAGAGGGTGCCCTTAATTAGGTGTAGAAATAGAATTTTTGT CTCCTTGTGATTATTTGCTATAGAAGGTATATTGTGAGAAACAGGAAAGCAGGATATATATTTTTTGGTTTAATGAACAT TCTTCTTCAACTTTGGTACTATCTCTCTTGGTCTTGTAGCTTCTGTTACCTTGGCTTTGTAGATCATTCTGTCCATGGAT TTTAATACAAATTGGTGTGAAGTAATGGTAAAATATCCTTGGACTATTAGATGCTCTCAAGTCTCAACCTTCACTACATT CCAAGCATTTTGGAATTCTTGAGGAGCTTTTTAACAAGATGTGCTAGCCAAACTTTTATGGAATATTGTAAAAGGTGGAG TTAAATATCAAAAAAATCTTTGTTGAAGATGATAATAGTGGCTGTTGTACTTGTACAATGATTCTTCATTACCTGCTCGT GTTCATGTTACATATCAGCATGCAGTGGCATACAGAGTTGGTATCAGCTAGTAGTCCTGCACATAGTCCACTTATTCAGG TATTGGATTTTAATCCCTTGTTTGAAAGTTCTGTCTTAACAAAGTTTTCTCATGAGTTATGACATCAGTCATAAATAATT AATGAAGGAATAAATCCAACACTGTTGATTAAGATTCCACAAATTCAAATTGATTTCAAGTTTTAACCAAACATGCACTT TGGTAGTTAGAGGAATTGGTATCTATACTAAGGGCAATGGGAAAGTTGAGATTGTTGCCAGACCCGCTACATGGTTACAT GTGCTTGAAGACAAACTTTAGACAAAGGCAGAAAAGGCCATCATTTGTTTGCATTCTCACTTTTTTCTATTGAATTTGCT CTGTTGGTTCTGAAACTGAAATTGCATTGTCAATACTTCCTGTCAAGTTGATCTTAATTGGGACAAACGCTTTTTACATC TGCTCTTTCATTTATCAATCTTTTATGCCAAGCTGCAATGAGCTACTTCATTGGTTTAATCGAATTCTATTTTTATGATA GGGTTGGTTGGCCATTCTGTTAATCTCTAAGCTGGTTTTCCATTAATCTCATGGATCAAATCTGGAGTTGCTACTCATAA TAATTGCAGAAGAGACAGAACCACTACACTACACACATTCCTCACAACAATAATATTGTTGACAAACAAAATATAAAGCA TCTAACTAACCCAAAAGGAATAAAAGTAAAAGGAAACAGAGTACAAGATATTATTTACACAAGGTGTGAGTGACATTTTA CAGAGCATTGCTATACCTATACTACTACTATAATACTATTAGTGTGTCGAGTTCATTCAGAGAAAAAGGAGCTTAAGATT TACAATAGAGATAAAAGCAATCCAAGCCAAACAAGGCTTGATCAGATCACGCGCAACAGGATTCTCCTTCCCAAACACAC GCATGCACCCGATGATGCTCCCAAGCAATCCAAAGCACACCACCAAGCCCAGTCTCGCTGCCCCTGCACCAAACACTAGA GGGTTCCAGAGCACCGTGCAGAGGAGCTGAGCCAAGTAAAGCAAGATGGCAACAGGGTTTCTGTGGAAGCCTCCATCCGC CCACACCATCCACGCCGAAACACCGGTCAAGAGGGTGGAAGCGAGGCACGTGAGATGCAGGGCCCACGAGGGCGGGAACC AGAAGGGCTTATCGACGTGAGCACGTGATGACTGGGAGGAGGTCATGTAAATGGAGAAGAGGGTGAGGGTGAGAGGGAAG GAAACGGCTATGGCGAGTGATTTGAGGCCGCGTTTGGCCATCACTGATCGTTTGGTCTGTTTGATGTCTCTGGCACCGTT GTCAGTGGCGGTGACACGTTGTCTGAGCTGTGTGGAAGCCATGTTTGGAATTCAAGATCAAAATGAAACAGAGAATGATG GAATGGAAGAAAAACAGAGAATAATTGTAGTATCAGTTAGTTAAGCGAGTTTTGGAGATGGAGAGTGAAGGGGTTTTAAT TTGTTAGTTTTAAATAAGTGGGAGTGCGTGTTTTTCTCGCGTGGTTGGGGGGAACTGAGACTGTGATGTGAGAGATGAGT GACGCGTGGATGGTGGAGATAGAAAGGGTTCAACGCGTGTGCAACAGACAACACTTGGCAGTGACAGAGTCGATGATGAT GCTGGAAGATGGAAGTGTGGAAGCTGGTCCAAAACTGTACGTGGCAATTTCATTCTTGGAGGATAAGGGCATTACTACTT CACTGTTATGACCGACTCCAACACCAACACCTGTTCAGTTCAACTTCAATTGGATTGTCTTCAGCTGACACAGCATCAAG TGTATGAATGAAGAAACATCACTTTTTGAATTGAATTGACATACTTTAATCCCAACACATAACCGCCCTAACCTGAGATA TTATATTCCGCAAGCAGTACATTTTGACATTCTTATTCTTTATGGAGAAAAAATATCTTCACAACCTCCAAAAGAATCAG AATAACATGTAATATTTGTGTACCACAAATCCCAGACATGGTAAAG
CDS sequence (LotjaGi1g1v0766100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAGACAAGTGTTTGGGTTCTCAAAAGGCAAGAAGATTCCAGAGATTTCTCAGCCAGTGCAAGGTCACAATCCTCTG TTTTTTCCTCACCATTGTTGTCCTGCGCGGCACCATCGGCGCCGGAAAATTCGGAACGCCGGAGCAGGACTTCGTCGACC TTCGTAACCGCTTATCCTCCCGGAAGCTTGCCGAGCCTCATCGTGTTCTCGGTGAGCTTCATTCCACCACCAATTACAAC GCCTTCGACATCAACACCATATTGGTCGATGAAGAAGAAGAAGGAGAAAAGGACCCTGAGAAACGGAACCCTCACGAGCC TTATCGTCTTGGACCCAAAATCTCCAATTGGGATGAACAGAGATCGAAGTGGCTTCGTGAAAACCCTAATTACCCGAATT TCATTCGACCCGGCAAGCCTCGGGTTCTTCTGGTAACTGGGTCGTCGCCGAAACCGTGTGAGAATCCTGTTGGGGATCAT TACTTGTTGAAGTCTATTAAGAACAAGATTGATTATTGTCGCTTGCATGGTATTGATGTGTTCTACAACATGGCTCTGTT TGATGCTGAAATGGCAGGGTTCTGGGCGAAGCTTCCTTTGATTCGGAAGCTTCTTTTGTCTCATCCTGAAGTGGAGTTTC TGTGGTGGATGGATAGTGATGCCATGTTCACTGACATGGCATTTGAAGTGCCGTGGGAGAGGTATAAGAACTCTAACTTG GTGATGCATGGTTGGAAAGAGATGGTGTATGACCAGAAGGATTGGATTGGGTTGAACACTGGGAGCTTTCTGTTGAGGAA CTGCCAATGGTCTTTGGATATTCTTGATGCCTGGGCGCCAATGGGGCCAAAAGGGAAAATCAGGGATGAGGCTGGGAAAT TGCTGACAAAGGAGCTGAAAGACAGGCCTATTTTTGAAGCTGATGATCAATCAGCGATGGTTTATTTGCTGGCGAAAAAG AGGGACTTGTGGGGTGATAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGTTACTGGGGTATTCTGGTTGATAAGTA TGAGGAGATGATTGAGAATTACCACCCTGGTTTTGGGGATCATAGGTGGCCGTTGGTCACTCATTTTGTGGGTTGTAAGC CTTGTGGGAAGTTTGGGGATTACCCTGTTGAGAGATGCTTGAAGCAGATGGATAGGGCTTTCAATTTTGGAGATAACCAG ATACTGCAGATTTATGGGTTCACTCACAAGTCTTTGGGTAGTAGGAGGGTTAAGAGAATACGGAATGAGAGTAGCAATCC TCTTGAGGTCAAAGATGAACTTGGCTTGCTTCATCCAGCATTTAAAGCAGTTCATGTATCATCATCATCTAGCTGA
Protein sequence (LotjaGi1g1v0766100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLDKCLGSQKARRFQRFLSQCKVTILCFFLTIVVLRGTIGAGKFGTPEQDFVDLRNRLSSRKLAEPHRVLGELHSTTNYN AFDINTILVDEEEEGEKDPEKRNPHEPYRLGPKISNWDEQRSKWLRENPNYPNFIRPGKPRVLLVTGSSPKPCENPVGDH YLLKSIKNKIDYCRLHGIDVFYNMALFDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKNSNL VMHGWKEMVYDQKDWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDEAGKLLTKELKDRPIFEADDQSAMVYLLAKK RDLWGDKVYLENGYYLHGYWGILVDKYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQ ILQIYGFTHKSLGSRRVKRIRNESSNPLEVKDELGLLHPAFKAVHVSSSSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 449 | 449 | 3.9E-285 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 449 | 449 | 3.9E-285 | – | |
| TMHMM | 21 | 40 | 20 | - | – | |
| Phobius | 21 | 39 | 19 | - | – | |
| Phobius | 40 | 451 | 412 | - | – | |
| MobiDBLite | 91 | 112 | 22 | - | – | |
| Pfam | 139 | 378 | 240 | 4.8E-73 | ||
| Gene3D | 140 | 278 | 139 | 1.1E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0766100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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