Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PR00368
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 83 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.044s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0018789.1
n.a. PREDICTED: thioredoxin reductase 2-like [Glycine max] gi|356561017|ref|XP_003548782.1| chr0 7397213 7400094 +
1 domain prediction
 –
Lj0g3v0049079.1
n.a. PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Cicer arietinum] gi|502166343|ref|XP_004513864.1| chr0 16575249 16581584 +
1 domain prediction
 –
Lj0g3v0049079.2
n.a. PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Cicer arietinum] gi|502166343|ref|XP_004513864.1| chr0 16575249 16582924 +
1 domain prediction
 –
Lj0g3v0049159.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA2-like [Glycine max] gi|356511355|ref|XP_003524392.1| chr0 16619511 16622163 +
1 domain prediction
 –
Lj0g3v0049349.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA2-like [Glycine max] gi|356529622|ref|XP_003533388.1| chr0 16742786 16746402 +
1 domain prediction
 –
Lj0g3v0085899.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA3-like [Glycine max] gi|356533385|ref|XP_003535245.1| chr0 34509104 34512194 +
1 domain prediction
 –
Lj0g3v0101099.1
n.a. Dimethylaniline monooxygenase [Medicago truncatula] gi|357436843|ref|XP_003588697.1| chr0 42816185 42818337 -
1 domain prediction
 –
Lj0g3v0132519.1
n.a. PREDICTED: probable NADH dehydrogenase-like [Glycine max] gi|356566086|ref|XP_003551266.1| chr0 60481147 60486135 +
1 domain prediction
 –
Lj0g3v0162379.1
n.a. PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10-like [Cicer arietinum] gi|502137320|ref|XP_004503045.1| chr0 76558290 76558976 +
1 domain prediction
 –
Lj0g3v0166979.1
n.a. PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2-like isoform X1 [Cicer arietinum] gi|502100498|ref|XP_004491733.1| chr0 79404303 79408319 +
1 domain prediction
 –
Lj0g3v0338859.1
n.a. cytosolic-like glutathione reductase [Lathyrus sativus] gi|166239743|gb|ABY86428.1| chr0 177451440 177458490 -
1 domain prediction
 –
Lj1g3v2036560.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA6-like [Glycine max] gi|356507869|ref|XP_003522685.1| chr1 23982085 23986890 +
1 domain prediction
 –
Lj1g3v3642090.1
n.a. PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2-like isoform X1 [Cicer arietinum] gi|502100498|ref|XP_004491733.1| chr1 41935567 41939640 -
1 domain prediction
 –
Lj1g3v4528740.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA8-like [Glycine max] gi|356572315|ref|XP_003554314.1| chr1 53502790 53504610 +
1 domain prediction
 –
Lj1g3v4764550.1
n.a. PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10-like [Cicer arietinum] gi|502112410|ref|XP_004494322.1| chr1 57376410 57378105 -
1 domain prediction
 –
Lj1g3v4764680.3
n.a. PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10-like [Cicer arietinum] gi|502112410|ref|XP_004494322.1| chr1 57409399 57411939 -
1 domain prediction
 –
Lj2g3v1012870.2
n.a. PREDICTED: L-aspartate oxidase-like [Cicer arietinum] gi|502090596|ref|XP_004489279.1| chr2 15426278 15430434 +
1 domain prediction
 –
Lj2g3v1574220.1
n.a. PREDICTED: thioredoxin reductase 2-like [Cicer arietinum] gi|502161816|ref|XP_004512292.1| chr2 25107910 25114151 +
1 domain prediction
 –
Lj2g3v2279580.1
n.a. PREDICTED: alternative NAD(P)H dehydrogenase 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502096048|ref|XP_004490609.1| chr2 33309635 33315049 +
1 domain prediction
 –
Lj3g3v2948580.1
n.a. PREDICTED: apoptosis-inducing factor homolog A-like [Cicer arietinum] gi|502145876|ref|XP_004506219.1| chr3 36736821 36739222 -
1 domain prediction
 –
Lj3g3v3189630.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA10-like [Glycine max] gi|356507473|ref|XP_003522490.1| chr3 39390238 39392336 +
1 domain prediction
 –
Lj4g3v0445550.1
n.a. External NADH-ubiquinone oxidoreductase [Medicago truncatula] gi|357475923|ref|XP_003608247.1| chr4 5883185 5888896 -
1 domain prediction
 –
Lj4g3v0447890.1
n.a. PREDICTED: probable NADH dehydrogenase-like [Glycine max] gi|356521315|ref|XP_003529302.1| chr4 6025388 6031130 +
1 domain prediction
 –
Lj4g3v2251430.1
n.a. PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like [Cicer arietinum] gi|502150750|ref|XP_004508105.1| chr4 31176328 31178869 +
1 domain prediction
 –
Lj4g3v2268720.1
n.a. Dihydrolipoyl dehydrogenase [Medicago truncatula] gi|357478937|ref|XP_003609754.1| chr4 31687060 31692896 +
1 domain prediction
 –
Lj4g3v2827910.1
n.a. PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502139769|ref|XP_004503895.1| chr4 37948896 37953135 +
1 domain prediction
 –
Lj4g3v2827910.2
n.a. PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502139769|ref|XP_004503895.1| chr4 37948912 37953135 +
1 domain prediction
 –
Lj4g3v2990090.1
n.a. PREDICTED: monodehydroascorbate reductase, chloroplastic-like [Cicer arietinum] gi|502139186|ref|XP_004503675.1| chr4 39497401 39503327 +
1 domain prediction
 –
Lj5g3v1015430.1
n.a. PREDICTED: glutathione reductase, chloroplastic/mitochondrial-like isoform X1 [Cicer arietinum] gi|502115176|ref|XP_004495142.1| chr5 16757617 16766224 -
1 domain prediction
 –
Lj6g3v2083620.1
n.a. PREDICTED: NAD(P)H dehydrogenase B2, mitochondrial-like [Cicer arietinum] gi|502079444|ref|XP_004486261.1| chr6 24587757 24592778 +
1 domain prediction
 –
LotjaGi1g1v0119000.1
n.a. Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; TAIR: AT2G29990.1 alternative NAD(P)H dehydrogenase 2; Swiss-Prot: sp|O80874|NDA2_ARATH Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial; TrEMBL-Plants: tr|G7JZJ2|G7JZJ2_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi1g1v0119000 LjG1.1_chr1 18817658 18826545 +
1 domain prediction
 –
LotjaGi1g1v0119000.2
n.a. Internal alternative nad(P)h-ubiquinone oxidoreductase a1, mitochondrial; TAIR: AT1G07180.1 alternative NAD(P)H dehydrogenase 1; Swiss-Prot: sp|Q8GWA1|NDA1_ARATH Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; TrEMBL-Plants: tr|G7JZJ2|G7JZJ2_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi1g1v0119000 LjG1.1_chr1 18817781 18822253 +
1 domain prediction
 –
LotjaGi1g1v0119000.3
n.a. Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; TAIR: AT2G29990.1 alternative NAD(P)H dehydrogenase 2; Swiss-Prot: sp|O80874|NDA2_ARATH Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial; TrEMBL-Plants: tr|G7JZJ2|G7JZJ2_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi1g1v0119000 LjG1.1_chr1 18817781 18822253 +
1 domain prediction
 –
LotjaGi1g1v0271600.1
n.a. Flavin-containing monooxygenase; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|K7KM38|K7KM38_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0271600 LjG1.1_chr1 66352740 66355665 +
1 domain prediction
 –
LotjaGi1g1v0318500.1
n.a. Flavin-containing monooxygenase; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|I1JY26|I1JY26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318500 LjG1.1_chr1 76671797 76672545 -
1 domain prediction
 –
LotjaGi1g1v0399200.1
n.a. Flavin-containing monooxygenase; TAIR: AT5G25620.1 Flavin-binding monooxygenase family protein; Swiss-Prot: sp|Q8VZ59|YUC6_ARATH Indole-3-pyruvate monooxygenase YUCCA6; TrEMBL-Plants: tr|I1JUR3|I1JUR3_SOYBN Flavin-containing monooxygenase; Found in the gene: LotjaGi1g1v0399200 LjG1.1_chr1 88622558 88627702 +
1 domain prediction
 –
LotjaGi1g1v0608300.1
n.a. Monodehydroascorbate reductase; TAIR: AT3G27820.1 monodehydroascorbate reductase 4; Swiss-Prot: sp|Q9LK94|MDAR4_ARATH Monodehydroascorbate reductase 4, peroxisomal; TrEMBL-Plants: tr|A0A072TXL0|A0A072TXL0_MEDTR Monodehydroascorbate reductase; Found in the gene: LotjaGi1g1v0608300 LjG1.1_chr1 115273073 115278372 -
1 domain prediction
 –
LotjaGi1g1v0701500.1
n.a. Flavin-containing monooxygenase; TAIR: AT4G28720.1 Flavin-binding monooxygenase family protein; Swiss-Prot: sp|Q9SVU0|YUC8_ARATH Probable indole-3-pyruvate monooxygenase YUCCA8; TrEMBL-Plants: tr|I1N9Y0|I1N9Y0_SOYBN Flavin-containing monooxygenase; Found in the gene: LotjaGi1g1v0701500 LjG1.1_chr1 126984907 126987173 -
1 domain prediction
 –
LotjaGi1g1v0744800.1
n.a. Flavin monooxygenase-like protein; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|I3T5D4|I3T5D4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0744800 LjG1.1_chr1 131814337 131818942 -
1 domain prediction
 –
LotjaGi1g1v0745100.1
n.a. Flavin monooxygenase-like protein; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|A0A072U3V7|A0A072U3V7_MEDTR Flavin-binding monooxygenase-like protein; Found in the gene: LotjaGi1g1v0745100 LjG1.1_chr1 131827852 131831244 -
1 domain prediction
 –
LotjaGi1g1v0745100.2
n.a. Flavin monooxygenase-like protein; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|A0A1J7IGQ1|A0A1J7IGQ1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0745100 LjG1.1_chr1 131828993 131831042 -
1 domain prediction
 –
LotjaGi1g1v0745200.1
n.a. Flavin-containing monooxygenase; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|I3T5D4|I3T5D4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0745200 LjG1.1_chr1 131850182 131853165 -
1 domain prediction
 –
LotjaGi2g1v0119800.1
n.a. Glutathione reductase; TAIR: AT3G24170.1 glutathione-disulfide reductase; Swiss-Prot: sp|Q43621|GSHRC_PEA Glutathione reductase, cytosolic; TrEMBL-Plants: tr|A0A151S7T2|A0A151S7T2_CAJCA Glutathione reductase, cytosolic; Found in the gene: LotjaGi2g1v0119800 LjG1.1_chr2 44142152 44175188 +
1 domain prediction
 –
LotjaGi2g1v0119800.2
n.a. Glutathione reductase; TAIR: AT3G24170.1 glutathione-disulfide reductase; Swiss-Prot: sp|Q43621|GSHRC_PEA Glutathione reductase, cytosolic; TrEMBL-Plants: tr|A0A151S7T2|A0A151S7T2_CAJCA Glutathione reductase, cytosolic; Found in the gene: LotjaGi2g1v0119800 LjG1.1_chr2 44142554 44174547 +
1 domain prediction
 –
LotjaGi2g1v0119800.3
n.a. Glutathione reductase; TAIR: AT3G24170.1 glutathione-disulfide reductase; Swiss-Prot: sp|Q43621|GSHRC_PEA Glutathione reductase, cytosolic; TrEMBL-Plants: tr|I1MNX4|I1MNX4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0119800 LjG1.1_chr2 44142587 44173905 +
1 domain prediction
 –
LotjaGi2g1v0216000.1
n.a. Flavin-containing monooxygenase; TAIR: AT5G25620.1 Flavin-binding monooxygenase family protein; Swiss-Prot: sp|Q8VZ59|YUC6_ARATH Indole-3-pyruvate monooxygenase YUCCA6; TrEMBL-Plants: tr|A0A151QUS7|A0A151QUS7_CAJCA Flavin-containing monooxygenase; Found in the gene: LotjaGi2g1v0216000 LjG1.1_chr2 66849698 66853555 +
1 domain prediction
 –
LotjaGi2g1v0246300.1
n.a. Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; TAIR: AT5G14760.1 L-aspartate oxidase; Swiss-Prot: sp|Q94AY1|NADB_ARATH L-aspartate oxidase, chloroplastic; TrEMBL-Plants: tr|A0A0B2R629|A0A0B2R629_GLYSO L-aspartate oxidase; Found in the gene: LotjaGi2g1v0246300 LjG1.1_chr2 71194093 71199966 +
1 domain prediction
 –
LotjaGi2g1v0352600.1
n.a. Thioredoxin reductase; TAIR: AT2G17420.1 NADPH-dependent thioredoxin reductase A; Swiss-Prot: sp|Q39242|TRXB2_ARATH Thioredoxin reductase 2; TrEMBL-Plants: tr|K7LNQ6|K7LNQ6_SOYBN Thioredoxin reductase; Found in the gene: LotjaGi2g1v0352600 LjG1.1_chr2 82865206 82871793 +
1 domain prediction
 –
LotjaGi3g1v0459400.2
n.a. External alternative nad(P)h-ubiquinone oxidoreductase b2, mitochondrial; TAIR: AT4G21490.1 NAD(P)H dehydrogenase B3; Swiss-Prot: sp|F4JJJ3|NDB3_ARATH External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial; TrEMBL-Plants: tr|A0A0B2S7G8|A0A0B2S7G8_GLYSO External NADH-ubiquinone oxidoreductase 1, mitochondrial; Found in the gene: LotjaGi3g1v0459400 LjG1.1_chr3 87401480 87413225 +
1 domain prediction
 –
LotjaGi3g1v0459400.3
n.a. External alternative nad(P)h-ubiquinone oxidoreductase b2, mitochondrial; TAIR: AT4G21490.1 NAD(P)H dehydrogenase B3; Swiss-Prot: sp|F4JJJ3|NDB3_ARATH External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial; TrEMBL-Plants: tr|A0A072UKI3|A0A072UKI3_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi3g1v0459400 LjG1.1_chr3 87407722 87414458 +
1 domain prediction
 –