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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0119000 |
| Transcript ID | LotjaGi1g1v0119000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; TAIR: AT2G29990.1 alternative NAD(P)H dehydrogenase 2; Swiss-Prot: sp|O80874|NDA2_ARATH Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial; TrEMBL-Plants: tr|G7JZJ2|G7JZJ2_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi1g1v0119000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18817781..18822253) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCTGGTTCAGAAACCTCTCCAAATTTTCCACCACAACCACACTTCCCCGATCCAAAACCACGCTCCTCTCGCCACG TTTCACTTTTCTGATCTCTCGCTTCACCACGGCGACGGAGACCCCAGTTTCCGGTTCAACCGGGTTGGCTCCCCATGCCG GTTTGGCGCCCACGAAGCCGCACGAGAAGCCGCGTGTGGTGGTGCTGGGGACCGGTTGGGCCGGGTGCAGGCTCATGAAG GGGTTGGACACTGCAATCTACGACATCGTTTGCGTCTCCCCTCGGAATCACATGGTGTTCACGCCTCTCTTGGCTTCCAC TTGTGTTGGAACTCTTGAGTTTAGATCGGTTGCTGAACCCATTGCCAGGATCCAACCTGCTATTTCCAGGGAGCCTGGTT CTTATTTCTTCCTTGCTAATTGTACTGGTGTTGATGTTGATAAGCATGAGGTATGTATGTTGATTTTGAAATTTGGAAAG CATAATCAGTTTTGTAGAATCTGGGTTAAAATCAATTCTAACTAGTTGAAATTATGTTTGGATGTACTAGTAAAGCAGAA TTAGTTTTAGTTGTCACATCAAACAGTAGCTTCTGCGTTAAGCATAATCAATTCTGTGATTTTACTAGTGAATTTTATCA TGCAAAACCTGCTTTTTTTTCATTAAGGTATCTAAATATAAGTCTCATCATTTTACCACATGTTTACAATAGGCAGTTTT AGTAGAATTGATTCTGCTAACGCTGATACGAATAGACATTCAATTTTATGTTGTTTTTTTAGCTGAGGGGCCACATACTT CTGTGTTGGAACTTGAAATGTTCATATATTTTAGTTATTGGGGGGGGGGGGGGGGGTTGAAGTATCCCATTGGCCAGGTT TGGAATATCTCACAGAATTAAATTGTAACTTGTAACTATAAGAGTTTCTGGTTGGGGGATGGAAAATTAGGTGTCAGGGC ATAAATATGTAATGATGTTTTGTTTGATAGACTTTTTTTGGTTTTGGAGTGGTAGATTTTATAATTTTATTTTAGATTAG TGTCTTTTCTTAATAAGAAGGATAGGTGGAAGTGATTGAATCAAGTGTCATGATAAATTGAGCATTGTGTGGTCACTTGA TGATGGAAATGTATGGCAAACATGAATTGTGTGATTTTTGCCTCCAGCATGCTTTTCTGCAACTTTTATAAGAAGGAATG TATTGAAGAAGAAGACTAGTCAAGAGAATGAAGAGAGAGAAGGGATTCGAAATATTTGATGAATTGTAGTGTATTGTATT ATCTGATTCAGAATATTAGGAAGCTTAATTTGCACTCAAGCTAAATCCCATGACATATAACAGATTCAGTTATATGTTGT TTTAAAACTAGATAACAGATTTAACAACCAACAGTCTTAGAGAAATAATCCAGTACGACAGATTCTAGCAGAATGTATTC AAGGATTTAACAATACCATGAGATATCTGATTATATGACCAGTAGAGCATGCTAGCATTTTCAAAGAAGGAAAATCATTG CAATTTTTTAGGAAAGAATCTTAGGATCTATTGAAACTAAAAGGGATTTATTCAGAGTTTGAAACCAGTGTAAGGTACCA AACTGTAAATGGTTTCATTGAACTGTTTGATCCTCTTGGTCTACCCTACCTAGGGAGATAGAGCTCGTTAATTGCTTTAT TGGAACTCAAACTTTAAAATAAATGCCTGGCAACGGAAGCCCCAATCAAAACTCAATTACATATCTATTTCTACTCTTTC TCCTCTCCTCCAAACAAATATGTATGATACTAGTATTAGTTGAACCGTAGTTACTCACAATGATGCTTAATATGCGAGAA TCTGACATGGTTTTAAAGGTGCAATGTGAGACTGTGACTGAAGGAACACAGGCTCTAGATCCTTGGAAGTTCTCAATCGC CTACGATAAGTTAGTAATTGCATTAGGAGCACAACCTACAACTTTTGGAATTCATGGAGTCCTTGAACATGCAATTTTTC TTCGAGAAGTTTACCATGCACAGGAAATTCGTCGGAAATTGCTTCTGAACTTGATGATGTCCGATGTTCCAGGTTTGCAA CATTTTGCTATATTAGCTTAATATGAAGTCATTTTGGAAAAGAGTGTTAGACTTTAGACTATACAATACCTTTGTAATTT GTATTTGATTTGGATGCAGGGATTGGGGAAGAGGAAAAGAAAAGGTTGTTACACTGTGTGGTTGTGGGAGGTGGTCCTAC CGGAGTTGAATTCAGTGGTGAACTGAGTGATTTTATCATGAGAGATGTCCGTCAGAGATATTCTCATGTGAAGGACTATA TCCATGTTACTTTAATTGAGGTATACTTGGTCGGACTATATACGTGATACAACTAATAGACTGTACATTTGTTATGCCTT GTTGCTCCTGCCATTGTATATCTTCAATGTCATCACATTTTGCTAAATTGTTTGAAACACCTTAGAGTGCATGTAAGCCA ATTTTATCGTAAGAAATTATCCATTTTTTCCATGCCAAAAGTTTCTTTCGAGTTGATTTGTGTTGCTAACCAATTTATGT GTGCCTTTTTAGGCCAATGAGATATTGTCTTCCTTTGATGTTCGACTAAGGCGCTATGCCACCAAGCAGTTGACAAAGGT AAGCCTTATGTTGAAAGAATTTCTTTAGTGTTTGTTCATCACGTTCCTGTTGTTGATTTTTAACTTCTGAATATCATGTG AGAAAGCTAAACTCTTCTCTCCATCTAAAGAAAATTGGTCTATGTAATAACCAAAATACCAAATATAATCAAGGTTCACT GTTTCTGGCTGAGTAATTTGGAATCTTTTCAAACAATAGATAGAAATCTTCATCATAGTGCGAAAAGTATGCTAAAAACT GATTGAGCTGTTAAAACTTTTCAATACTAGTATTTCTTCTCATGTTGAGTTTTCTATCAGTCAGGAGTCCGACTTGTTCG TGGCATTGTGAAAGATGTTGATGATCAGAAAATTATCCTTAATGATGGTACGGAGGTTCCATATGGATTGTTGGTATGGT CTACTGGAGTTGGTCCATCTTCTGTTGTCAGCTCTTGGGATCTCCCTAAATCTCCCGGTGGAAGGTTATTTGTTTTCTTT TCATTGACAACCAATGCAAATTTACAAATTAGCTGATTTCGGTATAAATATAGCATTTTGATGTGTCATTTAATGAAAGC AGGATCAAATTTGTCCAAGGATACTATGTTTTCACATTATATGCATGTATTTTTGTATGAAATGAATGGCAAACCAACAA ATAACTTCAGCATATGAATTTCTTTTAGTTTCATATTTGGATACAAAGTTTGTCTCATCCATGTCATGCTCATAAAATTT CACATAAGTCCAAGATCTTTTTTCTCCGTGACATGTAGTTTTCAAACGTAAAAGTATCACTAATTTGTTTATGCACTCGT TTGTATTTAAATCTTCCGAAATTTGGAATGGAAGTCAATATCTGAAAAGGATTTATTTTCTGTATAAAGTTATTTGGGGG TGTAAGCATTTCAAGGCTGATATCGGTGCCAGTTGACCTCTATATCCATATCTATATGTAGTTACGTTTTACTTTCCTAC TCACTTGTGCACCACATCCACAAGTTTCTCTTAGCTGTATCAGATTTCCTTGTATCTGATATACCTTTGGTGTGCCCTGT CTTTCTCCCTCATGTTTCTTTCTAGTTCTGAAAGTTTTCTTTTCACAGGATTGGCATTGATGAGTGGCTTCGTGTTCCCT CAGTACAAGATGTCTACGCAATTGGTGACTGCAGTGGATTTGTTGAAAGCACTGGAAAACCAATACTTCCGGCTTTAGCC CAAGTAAGTTACATTAGGTTCATTAGTTTCTCCTGCACACTCTATTTCTTAAGTTCCTGAAATTTGCAGTTTTGTTGTTA CTTAACACTAAGGTCTGGGTCTCTGATACATATCATTTGTTGCGGTTCATGGTTGAAGTGGTGTTGCATGTTTCTTCTTT GCCTGAAAGTTTGTTCTATCACTATAATGCTTTTTGATTTGAATCCAACAGGTAGCGGAGAGGCAAGGTAAATATTTAGC AAGCTTATTAAACAAAGTAGGAAAAGCGAACGGAGGCCGTGCAAACAGTGCAATAGACATAGAGTTGGGGGATCCTTTTG TTTACAAGCACCTTGGAAGCATGGCAACTGTTGGCAGTTACAAAGCTCTAGTTGACCTCAGAGAGAGCAAGGTGATTTTT TTGTCTTTCCTGAGCTCTTTTTGCTGGTGCTTTTAAAACTTGTTTATAGTTTTGATTCACTCAGTCTTTATCTCCCACAG GAGGGAAAAGGGGTAGCTCTGGCAGGTTTTGTCAGTTGGTTTATTTGGCGCTCAGCGTATCTAACTCGTGTCATCAGCTG GAGGAACAGATTCTATGTAGCTATCAACTGGGCTACAACTTTTGTGTTTGGCCGTGATATAAGCAGGATATGA
CDS sequence (LotjaGi1g1v0119000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTGGTTCAGAAACCTCTCCAAATTTTCCACCACAACCACACTTCCCCGATCCAAAACCACGCTCCTCTCGCCACG TTTCACTTTTCTGATCTCTCGCTTCACCACGGCGACGGAGACCCCAGTTTCCGGTTCAACCGGGTTGGCTCCCCATGCCG GTTTGGCGCCCACGAAGCCGCACGAGAAGCCGCGTGTGGTGGTGCTGGGGACCGGTTGGGCCGGGTGCAGGCTCATGAAG GGGTTGGACACTGCAATCTACGACATCGTTTGCGTCTCCCCTCGGAATCACATGGTGTTCACGCCTCTCTTGGCTTCCAC TTGTGTTGGAACTCTTGAGTTTAGATCGGTTGCTGAACCCATTGCCAGGATCCAACCTGCTATTTCCAGGGAGCCTGGTT CTTATTTCTTCCTTGCTAATTGTACTGGTGTTGATGTTGATAAGCATGAGGTGCAATGTGAGACTGTGACTGAAGGAACA CAGGCTCTAGATCCTTGGAAGTTCTCAATCGCCTACGATAAGTTAGTAATTGCATTAGGAGCACAACCTACAACTTTTGG AATTCATGGAGTCCTTGAACATGCAATTTTTCTTCGAGAAGTTTACCATGCACAGGAAATTCGTCGGAAATTGCTTCTGA ACTTGATGATGTCCGATGTTCCAGGGATTGGGGAAGAGGAAAAGAAAAGGTTGTTACACTGTGTGGTTGTGGGAGGTGGT CCTACCGGAGTTGAATTCAGTGGTGAACTGAGTGATTTTATCATGAGAGATGTCCGTCAGAGATATTCTCATGTGAAGGA CTATATCCATGTTACTTTAATTGAGGCCAATGAGATATTGTCTTCCTTTGATGTTCGACTAAGGCGCTATGCCACCAAGC AGTTGACAAAGTCAGGAGTCCGACTTGTTCGTGGCATTGTGAAAGATGTTGATGATCAGAAAATTATCCTTAATGATGGT ACGGAGGTTCCATATGGATTGTTGGTATGGTCTACTGGAGTTGGTCCATCTTCTGTTGTCAGCTCTTGGGATCTCCCTAA ATCTCCCGGTGGAAGGATTGGCATTGATGAGTGGCTTCGTGTTCCCTCAGTACAAGATGTCTACGCAATTGGTGACTGCA GTGGATTTGTTGAAAGCACTGGAAAACCAATACTTCCGGCTTTAGCCCAAGTAGCGGAGAGGCAAGGTAAATATTTAGCA AGCTTATTAAACAAAGTAGGAAAAGCGAACGGAGGCCGTGCAAACAGTGCAATAGACATAGAGTTGGGGGATCCTTTTGT TTACAAGCACCTTGGAAGCATGGCAACTGTTGGCAGTTACAAAGCTCTAGTTGACCTCAGAGAGAGCAAGGAGGGAAAAG GGGTAGCTCTGGCAGGTTTTGTCAGTTGGTTTATTTGGCGCTCAGCGTATCTAACTCGTGTCATCAGCTGGAGGAACAGA TTCTATGTAGCTATCAACTGGGCTACAACTTTTGTGTTTGGCCGTGATATAAGCAGGATATGA
Protein sequence (LotjaGi1g1v0119000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFWFRNLSKFSTTTTLPRSKTTLLSPRFTFLISRFTTATETPVSGSTGLAPHAGLAPTKPHEKPRVVVLGTGWAGCRLMK GLDTAIYDIVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLANCTGVDVDKHEVQCETVTEGT QALDPWKFSIAYDKLVIALGAQPTTFGIHGVLEHAIFLREVYHAQEIRRKLLLNLMMSDVPGIGEEEKKRLLHCVVVGGG PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDVRLRRYATKQLTKSGVRLVRGIVKDVDDQKIILNDG TEVPYGLLVWSTGVGPSSVVSSWDLPKSPGGRIGIDEWLRVPSVQDVYAIGDCSGFVESTGKPILPALAQVAERQGKYLA SLLNKVGKANGGRANSAIDIELGDPFVYKHLGSMATVGSYKALVDLRESKEGKGVALAGFVSWFIWRSAYLTRVISWRNR FYVAINWATTFVFGRDISRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 500 | 484 | 3.7E-301 | – | |
| PANTHER | 17 | 500 | 484 | 3.7E-301 | – | |
| Gene3D | 55 | 500 | 446 | 9.6E-150 | – | |
| SUPERFAMILY | 62 | 403 | 342 | 5.12E-20 | ||
| Pfam | 65 | 396 | 332 | 5.1E-60 | ||
| PRINTS | 66 | 85 | 20 | 1.6E-8 | – | |
| PRINTS | 172 | 190 | 19 | 1.6E-8 | – | |
| PRINTS | 233 | 251 | 19 | 1.6E-8 | – | |
| SUPERFAMILY | 233 | 404 | 172 | 3.48E-22 | ||
| PRINTS | 352 | 374 | 23 | 1.6E-8 | – | |
| Coils | 500 | 500 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0119000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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