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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2083620 |
| Transcript ID | Lj6g3v2083620.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: NAD(P)H dehydrogenase B2, mitochondrial-like [Cicer arietinum] gi|502079444|ref|XP_004486261.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 21 | 41 | 21 | – | – | |
| Phobius | 42 | 577 | 536 | – | – | |
| Gene3D | 47 | 125 | 79 | 2.70E-05 | ||
| SUPERFAMILY | 51 | 270 | 220 | 1.58E-27 | ||
| Pfam | 52 | 379 | 328 | 1.90E-58 | ||
| PRINTS | 54 | 73 | 20 | 3.00E-07 | – | |
| Gene3D | 126 | 315 | 190 | 2.30E-29 | ||
| PANTHER | 128 | 196 | 69 | 1.90E-16 | – | |
| PRINTS | 157 | 175 | 19 | 3.00E-07 | – | |
| PANTHER | 214 | 378 | 165 | 1.90E-16 | – | |
| PRINTS | 218 | 236 | 19 | 3.00E-07 | – | |
| SUPERFAMILY | 218 | 372 | 155 | 2.04E-18 | ||
| Gene3D | 351 | 392 | 42 | 9.60E-04 | ||
| SUPERFAMILY | 368 | 464 | 97 | 1.36E-07 | ||
| ProSiteProfiles | 375 | 410 | 36 | 11.752 | ||
| Gene3D | 393 | 456 | 64 | 7.70E-07 | ||
| Coils | 439 | 459 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj6g3v2083620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2083620.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.