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LotjaGi2g1v0214700.1

Overview

Field Value
Gene ID LotjaGi2g1v0214700
Transcript ID LotjaGi2g1v0214700.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|A0A0S3TCF7|A0A0S3TCF7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:66507517..66511544) extracted from Lotus japonicus Gifu genome v1.2.

TATGCACGTGTGTGTTCATTGTTCAATAGTATAAATAACTCTTTACTCTTGCATCCCCTTCACAGACAAAAGCCAAAACC ACACTCCCTCAAATTAACTACAATTGCTCTCTAGAGATGGCAAATCTCAGCAATGGCCTCTGCCATATAAACTCCTTTGT CAACATTCCAACAGTGAAGTTTACAAAGCTTTTCATCAATGGAGAATTCGTGGATTCAGTTTCAGGTTCTAACTTCTAAC AGTAAAGTTTCTTTGAATATATAATTGTTACAAAAATAAGCAAGATTTTACACAGGAGTGACAGGACTAAGAAAATTTTA ATACACTTTTTTTTTGAAACCTTGCCAAATAATAGTAGGGTAATGATTCCAATTTTTTTTTTTAAAATCAAACAATTAAG TCAAATTGTTACTAATATGTATTTTGGACTTTTGAAAAAAAAATAAAGGAAAAACGTTTGAGACAGTTGATCCAAGAACA GAGGAAGTGATTACAGAGATAGCAGAGGCTACCAAAGAAGATGTTGATATTGCTGTGAAGGCTGCACGTAAAGCATTCGA TTCTGGTTCATGGCCACGCATGACTGGTGCTGTAAGTTCAGATCTTCACCCTCTATTTCTATTATTATGGATTACAAATA AGGCATTCATCATTATCCAGGAAAAAAAAAACCAGTAGTTGTGGATTTTCAAGGTGAAAAGTTGCATGTTGAGTATTATA AACTATTTGAATACAAATAGCATATAAACTATTTCCATTACTGCTTTTTTTTTAATATTTATATGATGGTATGGTCTATG AGAAATTGAGAACTATTTTAGTTGGTTGCTTTCCATGGTGATAAAAAGAAAAAAAATTGCAGCAACACACTCATTTAAGC ATACTCTAACATACTCCATGTGATGGGTTTATTTTCCTAAAAGTCAATATATTTACCTAAATAGTATGTTTAAAAGAGTA TCGTGGTAGCATTTCTCAAATAGAAAATATATAAAAAATAGAGTATGTTAAAGGATCAAATATCATAAATTGAAGATTAA CAATTTTTCTCCCAAACATAAGCAGTGTTTCTCAAGTAGGGAGTAACATGTATTAATTAATTAATATGGTGTGGTCATGG GATATTTGTTTGTTAGGGGAGAGCAAAGATTATGCTGAAGTGGGCAGAGCTAATAGAACAGAACATAGAAGAATTAGCAG CATTGGACACCATTGATGGTGGGAAGCTATACAGTTGGTGTAAGGCTGTGGACATTCCTGAAGCCGCCAACCTCCTGCGT TACTATGCTGGTGCTGCTGATAAAATCCATGGAGATGTGTGCAAAACTTCCAGGGACCTCCACTTGTATACTTTAATGGA ACCGGTTGGTGTAGTTGGACACATTATTCCTTGGAATTTCCCCACCATCATGTTCTTTGGTAAGGTCAGCCCTGCCTTAG CTGCTGGCTGCACCGTGATCCTCAAGCCTGCTGAGCAAACACCACTCTCAGCACTCTTCTATGCTCATCTTGCAAAGCAG GTATGGTTTATCAAAATTGGATGAGTTTCTTATTAAATATAGTTCCTAATTCATTCAGAAACATTAGCATATTAGATATC CTGGTAATTTTATTAATCTGTGTTTGGTTCTACATTTAAGAGTCCTAGAATCAGCTCTCATTGTTCGGAATAGCTTTTAG GTGGTCATATAGGTGTTTAACAAATCGATTTCAAGAACTGATTTCAGTCCCAAAATAAATTTTGCGGAGAAGCTACTAGC TAGAGAGAGTAGCTTCTGTGGTGACAATTGCAGAATATCATAACATTACCCTATAGAAATTACTTTTTCCATAAATTTAT CCTAAAATTAATCACTTACTTCGCTTCACTTCCAACTCACTTTTAGTGTAATCAATAAATTTAATCAAAATCAATTCTAT CGCCGACAACCCTGATGGCCTGATCTAAACGCGCACCTAAATCCTAATATCACTAATACATGGATGAAAATAAAAATATA AGCTGACTGGTTTTTCTTGTTTTCCCTTTTGATGAAGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTACCCGGATTTG GTTCAATTGCTGGAGCTGCAATTACCTCACATATGGACATTGATGCTGTAATTTGAAAGTGCACTGTATATTTCATACCA ACTAGGCACCGGCAATCACTAAGTTTGCTTTGATTTTGTTATGTTACAGGTCAGTTTTACAGGTTCATCAGAAACAGGTC GTCAAGTAATGATGGCTGCAGCCATGAGCAATTTGAAACCTGTTTCGCTCGAATTAGGAGGCAAGTCACCGGTCTTGATT TTCGATGATGCTGATGTAGACAAAGCTGTTGAACTTGCTCTCTTTGGCATCCTGCACAACAAGGTATAGTTTCTTTCAAG AAACATAAAAAAGAACTAAGACTTATTATACCTCTACACTCTAGTAACTAACTCTGTAATTTTCAGGGAGAAGTCTGTGT TGCATTCTCCAGAGTTTTTGTCCAGGAAGGGATTTATGATGAGTTTGAGAAGAAGGTGGTGGAGAAGGCAAAAACTTGGG TAGTGGGAGACCCTTTTGATCCTAAAGTTCAGCAAGGCCCCCAAGTAAGGATACTTCAAAGGAGCATAAAATGCACAAAA TTGAGTGTGTTTGGTTTGGGAGACCCCAGAATCAAATCTGACATAGTAAAATCAATTGTGAATGACTATATAGAAGTTTG GAAGTCATTTTTGAGATTTGATATCAGTCCCAAATCAAATTTGCTAGAAACTAGAGAGTAACTTTTGCATTGGAGATGAT CAATTGTGAGATTTTACAACTTGATTTCACAGCAATACCCTGCAAAAGTCATTCATAAATGCATCCCAACATAAATCACG TTACTCTTAAGTCTTAACCCACTTTTACTATAATCAATGTTACCAAAATTAGTTTTATCCAAAATCAATTGTGAAAACAC TGATCCAAACACGCACTGAAGTATTTTATTTTATTTCAATTTTCATGTAGTTGCTTGCAGAAAAAGAAAAAGGTTAACAT GATTCTCCTCTGCACTTGGTTTTCTATGCAGACTAGTAAGGCACAATTTGATAAAATCCTTTCCTATATTGAGCATGGAG TGAATGAAGGAGCCACACTGTTGACTGGGGGCAAGACAGTGGGAAACAAGGGATACTATATTGGACCTACTATCTTTTCC AATGTTAAGGTGTATTTCAACTTTACCTCAAGCATGAAACTTGGCTATCTTTATCATAACTGAACAACTGACCTAAATAT TTTTATTTATTCATTTTGAAAATTGTGTGTAGGAGGACATGGTGATAGCAAAAGATGAAATATTTGGACCTGTGATGGTA CTTTCTAAGTTCAAGTGAGTACCCATGTTATTCTCCTTTTCCTTTTTCACTCAGCATAAACTTATTGAATGATAGGAACC TTTGAGAGAACCATACTACAAAAGTTAGTCGTACAATAGCCCTTTGACTAGTCCCCAATGTCAAAGGACATGTGGAAGAC TCTGTTACCAATTGATAAGAATTTTGGGAGAACCTTATCACAATTACAATGTCATATTTCTCATACGAGATTTAAGTTTC ATAACGTTGCAATTGGATCCTAACATAAAACTAATTTGGCATATGTACAACAGGATCATTGAGGAAGCAATTGAAAAAGC TAACAGCACAAGATACGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGACATTGCCAACACTGTCTCGAGGTCGATCC GTGCCGGCATCATTTGGATCAACTGCTTCTTTGCCTTTGACATTGACTGCCCTTTTGGAGGGTATAAGATGAGTGGATTT GGAAGAGATTATGGACTGGAAGCACTTCACAAGTATCTTCAAGTTAAATCAGTTGCAACTCCAATTTACAATTCACCATG GCTTTGAAAGTTTCATATGTTTTTGTAAACACTAAACATAAAAGTGTCTTTCACTGCTTAAGTTTTTTTCCCTCTCTTCT GGATTCTGAATAATAAAAGTTTTTGGCG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0214700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAAATCTCAGCAATGGCCTCTGCCATATAAACTCCTTTGTCAACATTCCAACAGTGAAGTTTACAAAGCTTTTCAT CAATGGAGAATTCGTGGATTCAGTTTCAGGAAAAACGTTTGAGACAGTTGATCCAAGAACAGAGGAAGTGATTACAGAGA TAGCAGAGGCTACCAAAGAAGATGTTGATATTGCTGTGAAGGCTGCACGTAAAGCATTCGATTCTGGTTCATGGCCACGC ATGACTGGTGCTGGGAGAGCAAAGATTATGCTGAAGTGGGCAGAGCTAATAGAACAGAACATAGAAGAATTAGCAGCATT GGACACCATTGATGGTGGGAAGCTATACAGTTGGTGTAAGGCTGTGGACATTCCTGAAGCCGCCAACCTCCTGCGTTACT ATGCTGGTGCTGCTGATAAAATCCATGGAGATGTGTGCAAAACTTCCAGGGACCTCCACTTGTATACTTTAATGGAACCG GTTGGTGTAGTTGGACACATTATTCCTTGGAATTTCCCCACCATCATGTTCTTTGGTAAGGTCAGCCCTGCCTTAGCTGC TGGCTGCACCGTGATCCTCAAGCCTGCTGAGCAAACACCACTCTCAGCACTCTTCTATGCTCATCTTGCAAAGCAGGCTG GTATCCCAGATGGAGTGCTCAATGTAGTACCCGGATTTGGTTCAATTGCTGGAGCTGCAATTACCTCACATATGGACATT GATGCTGTCAGTTTTACAGGTTCATCAGAAACAGGTCGTCAAGTAATGATGGCTGCAGCCATGAGCAATTTGAAACCTGT TTCGCTCGAATTAGGAGGCAAGTCACCGGTCTTGATTTTCGATGATGCTGATGTAGACAAAGCTGTTGAACTTGCTCTCT TTGGCATCCTGCACAACAAGGGAGAAGTCTGTGTTGCATTCTCCAGAGTTTTTGTCCAGGAAGGGATTTATGATGAGTTT GAGAAGAAGGTGGTGGAGAAGGCAAAAACTTGGGTAGTGGGAGACCCTTTTGATCCTAAAGTTCAGCAAGGCCCCCAAAC TAGTAAGGCACAATTTGATAAAATCCTTTCCTATATTGAGCATGGAGTGAATGAAGGAGCCACACTGTTGACTGGGGGCA AGACAGTGGGAAACAAGGGATACTATATTGGACCTACTATCTTTTCCAATGTTAAGGAGGACATGGTGATAGCAAAAGAT GAAATATTTGGACCTGTGATGGTACTTTCTAAGTTCAAGATCATTGAGGAAGCAATTGAAAAAGCTAACAGCACAAGATA CGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGACATTGCCAACACTGTCTCGAGGTCGATCCGTGCCGGCATCATTT GGATCAACTGCTTCTTTGCCTTTGACATTGACTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGA CTGGAAGCACTTCACAAGTATCTTCAAGTTAAATCAGTTGCAACTCCAATTTACAATTCACCATGGCTTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0214700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MANLSNGLCHINSFVNIPTVKFTKLFINGEFVDSVSGKTFETVDPRTEEVITEIAEATKEDVDIAVKAARKAFDSGSWPR MTGAGRAKIMLKWAELIEQNIEELAALDTIDGGKLYSWCKAVDIPEAANLLRYYAGAADKIHGDVCKTSRDLHLYTLMEP VGVVGHIIPWNFPTIMFFGKVSPALAAGCTVILKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGSIAGAAITSHMDI DAVSFTGSSETGRQVMMAAAMSNLKPVSLELGGKSPVLIFDDADVDKAVELALFGILHNKGEVCVAFSRVFVQEGIYDEF EKKVVEKAKTWVVGDPFDPKVQQGPQTSKAQFDKILSYIEHGVNEGATLLTGGKTVGNKGYYIGPTIFSNVKEDMVIAKD EIFGPVMVLSKFKIIEEAIEKANSTRYGLAAGIVTKNLDIANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYG LEALHKYLQVKSVATPIYNSPWL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11699:SF281
1 503 503 0.0 –
PANTHER
PTHR11699
1 503 503 0.0 –
SUPERFAMILY
SSF53720
15 499 485 4.58E-175
IPR016161
Pfam
PF00171
31 493 463 1.2E-176
IPR015590
Gene3D
G3DSA:3.40.605.10
36 492 457 3.1E-192
IPR016162
ProSitePatterns
PS00687
269 276 8 -
IPR029510
Gene3D
G3DSA:3.40.309.10
273 462 190 3.1E-192
IPR016163
ProSitePatterns
PS00070
297 308 12 -
IPR016160

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0214700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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