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LotjaGi2g1v0214500.6

Overview

Field Value
Gene ID LotjaGi2g1v0214500
Transcript ID LotjaGi2g1v0214500.6
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase family protein; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|K7L0H3|K7L0H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:66470132..66473575) extracted from Lotus japonicus Gifu genome v1.2.

CATAGTAAAATTGACATGAAGTGGTTTGATAATCAGGAAAGAGGAAGAATTATGATGAAATGGGCAGAGCTAATTGATCA AAACATAGAAGAAATAGCAGCACTAGATGCCATTGATGCTGGAAAGTTATTCCAATGGTGTAAGAACGTTGACATTCCTG GAGCAGCAAACACTATACGGTACTATGCTGGTGCTGCTGATAAAATTCATGGTGAGGTGTTGAAACATTCTCGGGAGATG CATGCGTATACTCTATTAGAACCAATTGGTGTTGTGGGACACATCATTCCCTGGAACTTCCCTAGCACCATGTTTGTTGC CAAGGTTGGTCCTTCCTTAGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCTGAACAAACACCACTTTCAGCTTTGTTTT ATGCTCATTTAGCTAAGCAGGTATGTCTCCAACAAATGCTTCATATTTCCTTATCAATCATAATTGACTTTCACGAGTTA GAGGGTGTCCGGATACTAGTTGAGTGTAAGATGAATAGACTTTCATTTTCCATTCACTTTTTATCTCGAAGTGAATGTTA ATGTCTGTTTACACTAGCGCTAACATGTATCCAAACATAGCCTTAACTGCTTGGGGCAAAGCTGAATATTGGTTTTGCTT GTTTTTATCTTTTGAAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGCCCGGATTCGGTCACACTGCAGGTGCTGCA ATAAGCTCTCACATGGACATTGATAAGGTAACTCAAATGCCGATTATTAGAATTCGAGTTAGGCATAACTCGAATTTGGG TTAGTGATAATTCCTAGGCAAGTGTACCTATTCGTTAAGTAGTAATAAATTATCGAACTCAAGGATTGCGATCGTCTAAA GCAATTTAACTTATTAAATAACTAAAAAGACTAAGGAAAAAGGTTTGGGGATGGATAATTGTTGTTGAAACGAACTTAAT TAATTGCAAAGTAAAGTGAAAAGCAAGTACGTAGTATTGAAAACAATCAAAAGGGGAAGTACCTGGGGTAGGATTTCATC AATTTCACTTATGTTCTTAATAGACTAATTAACTCATGAATTATCTAACTTATTTATGGTGCTTGCCTAAGTTTCTACGT GATAATCTCTTAACTACGTAGAACTTCCAATTAAACTACTAACACTAATCTCTTAGTTCCTAGACGAATTTAATTGGAGA ATTAAAACACTTAGTTACTAGCCAACACAATTAGAAGTTACCCTTATCTCTAAGGCGTAGGCGTTCCTAATCAATTCCTC ACCGGATCCATATTTTATACCGATTTCTCAATCGCATACAAAATAGCAAATTAAGTTAATCTTCATGCATAAAGATTCAT AGATAAAAGATGAGAAATTCATAAATAAAAATAGGATTCATGAGTCTAAAAAGTATATCAAAACATAAGATCAAAAGAGT CAAATCAGACACTCCAAGTACCTACGGAGGTTTAGCCAAGCATGACTTCCATGATCAAATAATTTATTGAAATAAAAAGG TTCTTCAAAAAGCTTCAAGTGCTAGGGTTAACTCCAGGAAAAAACTCAAAAACGGCTGCTGCTCTCAATACTGATCCCGT TTTTCTCCTCTGGTTCCAATATATATATTTCCGTTTCTTTCATTCCGTTTTCGTCTTTATCCCAAGTACAATCTGTTTTC AATCACGTGATCACCTTTTCTGTAGATTTTGCTTTTGGTCCAACTCTTGCCACGTGTCGCGTTGTAATTGGACCGAACTT TAAGTGTGTATTCCAGTACTTCGCGCACCACCATTCTTATGGTAGCCCTTCGTCATGATTGTAGCACATGGCAAAGAAGA AAACACCAACCGTTGGATCCACGCAGGTGCATGGTAAATTCCATGGAACAGCAGCGCCGGATCAGCTCCATTTTCCTGAT TTTCTCTTTTCCTTTTATTCTGAAAATCCTAAAAAGATAAAATAAATTAAAATAAATATTAAAAAGATAATAACTCAAAA TAAAACATATCAACTAAAAATAAAATAACTTAAATCCTAATAAATCAAAATAAAAATCATAAAAATATATAAAAATACTA AAAACCACATAAAAATAGTAAAATGCATGGAATAATCATGAAGTGACCTAAAATGACCAAAATATCCTAAATAATATGCC AAAATGCATGGAAATAAACTAGAAAAATAGCTTAAACACTCGGGTCATCAGTTAGGCTCTAATATCATATTAGAATTCGG GTTAGGCATAACTCTACTCCAAAAATTCGTTTAAAAGTGTGGATTGCTCTACTCTTTATAAGGATCTATCAAGCCATACC TGTGGTCAACAAGGAACCTTAATACCAATCATTTGGAAGTACCTTTGATTTAAAGTAAAACTAACAGAATTTTCTTGATT GTGTATATGTAGGTCAGCTTCACTGGTTCAACAGAAGTAGGCAGACAAGTAATGCAAGCTGCTGCTAAGAGTAATTTGAA ACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTTGTAATCTTTGATGATGCTGATGTGGATAAAGCTGCTGAGCTTG CTCTCTTGGGCATTCTATTTAACAAGGTGAAGTTTTTTTCATGAAATCCAAATCTTTATTACAAATTATAAGCCCAATTA TGAATTCTCTAACAATCTTTTATATACTTGTTTGATTTCAGGGAGAAATTTGTGTTGCCGGCTCCCGTGTATTTGTTCAG GAAGGAATCTATGATGAGTTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTAA AGTTCAACAAGGGCCTCAGGTATGAACATAGCAGCACAAAGTGTAAAATTGTTTGTTTTTTAAAACCCGCCAACTACTAG ATTTCAAGCATTGTACTTGGTTGTATGTATATAAAAAAAAAAGACTAGTTATTATAATCCTCCTCTGTTGGCTAAGAGTT TCTTCCTGTTTCAGGTTGACAAAAAGCAATTTGAAAAAATACTTTCTTATATTGAGCATGGAAAAAGAGAAGGGGCTACC CTTTTGACAGGGGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGTGAATTG TAATTCCACAAAGGATAAAAATGTTCTGTCTCCAAATAGTGTCTCAATTTTCTGTTCCACCAATGAAATCTCGTCATTTC AATTAAAAAGACGTCATGGGGCAGTTACAAACTTGCATAATTATTTTTAATCGACATATATTAGTGAGATAGAGAATGAG ACAGGGGACAAATTATTTCAATCCCCTTTTAGCATATATTTCAGATGACTAACCATCACATTCTCTTTTCCTTTCTATTC ATTATAACCTGTTTTTAGGAGGACATGCTTATAGTTCAGGATGAAATATTTGGCCCTGTGATGGCCCTGAAGAAGTTTAA GTAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0214500.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGTGGTTTGATAATCAGGAAAGAGGAAGAATTATGATGAAATGGGCAGAGCTAATTGATCAAAACATAGAAGAAAT AGCAGCACTAGATGCCATTGATGCTGGAAAGTTATTCCAATGGTGTAAGAACGTTGACATTCCTGGAGCAGCAAACACTA TACGGTACTATGCTGGTGCTGCTGATAAAATTCATGGTGAGGTGTTGAAACATTCTCGGGAGATGCATGCGTATACTCTA TTAGAACCAATTGGTGTTGTGGGACACATCATTCCCTGGAACTTCCCTAGCACCATGTTTGTTGCCAAGGTTGGTCCTTC CTTAGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCTGAACAAACACCACTTTCAGCTTTGTTTTATGCTCATTTAGCTA AGCAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGCCCGGATTCGGTCACACTGCAGGTGCTGCAATAAGCTCTCAC ATGGACATTGATAAGGTCAGCTTCACTGGTTCAACAGAAGTAGGCAGACAAGTAATGCAAGCTGCTGCTAAGAGTAATTT GAAACCAGAAGGAATCTATGATGAGTTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTAGTTGGTGATCCTTTTG ATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAAAAGCAATTTGAAAAAATACTTTCTTATATTGAGCATGGAAAAAGA GAAGGGGCTACCCTTTTGACAGGGGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGT TAAGGAGGACATGCTTATAGTTCAGGATGAAATATTTGGCCCTGTGATGGCCCTGAAGAAGTTTAAGTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0214500.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKWFDNQERGRIMMKWAELIDQNIEEIAALDAIDAGKLFQWCKNVDIPGAANTIRYYAGAADKIHGEVLKHSREMHAYTL LEPIGVVGHIIPWNFPSTMFVAKVGPSLAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGHTAGAAISSH MDIDKVSFTGSTEVGRQVMQAAAKSNLKPEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKR EGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALKKFK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.605.10
2 193 192 7.2E-79
IPR016162
SUPERFAMILY
SSF53720
5 289 285 8.25E-99
IPR016161
PANTHER
PTHR11699:SF284
6 188 183 1.5E-169 –
PANTHER
PTHR11699
6 188 183 1.5E-169 –
Pfam
PF00171
6 189 184 8.6E-66
IPR015590
PANTHER
PTHR11699:SF284
190 289 100 1.5E-169 –
PANTHER
PTHR11699
190 289 100 1.5E-169 –
Pfam
PF00171
190 289 100 8.6E-34
IPR015590
Gene3D
G3DSA:3.40.309.10
194 289 96 4.2E-36
IPR016163

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0214500.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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