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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR13301:SF31
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.023s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2605900.2
n.a. cellulose synthase [Gossypium hirsutum] gi|148841129|gb|ABR14737.1| chr4 35421773 35436144 -
1 domain prediction
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Lj4g3v2605910.1
n.a. PREDICTED: cellulose synthase A catalytic subunit 8 [UDP]-forming] gi|356528340|ref|XP_003532762.1| chr4 35423088 35440874 -
1 domain prediction
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Lj4g3v2605910.2
n.a. PREDICTED: cellulose synthase A catalytic subunit 8 [UDP]-forming] gi|356528340|ref|XP_003532762.1| chr4 35423270 35440874 -
1 domain prediction
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Lj6g3v1984430.1
n.a. PREDICTED: cellulose synthase A catalytic subunit 8 [UDP]-forming] gi|356515180|ref|XP_003526279.1| chr6 22964518 22971338 +
1 domain prediction
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LotjaGi6g1v0320400.1
n.a. Cellulose synthase; TAIR: AT4G18780.1 cellulose synthase family protein; Swiss-Prot: sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP]-forming]; TrEMBL-Plants: tr|I1K8R3|I1K8R3_SOYBN Cellulose synthase; Found in the gene: LotjaGi6g1v0320400 LjG1.1_chr6 63695878 63702605 +
1 domain prediction
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LotjaGi6g1v0320400.2
n.a. Cellulose synthase; TAIR: AT4G18780.1 cellulose synthase family protein; Swiss-Prot: sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP]-forming]; TrEMBL-Plants: tr|A0A072V4N8|A0A072V4N8_MEDTR Cellulose synthase; Found in the gene: LotjaGi6g1v0320400 LjG1.1_chr6 63696880 63702276 +
1 domain prediction
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LotjaGi6g1v0320400.3
n.a. Cellulose synthase; TAIR: AT4G18780.1 cellulose synthase family protein; Swiss-Prot: sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP]-forming]; TrEMBL-Plants: tr|A0A072V4N8|A0A072V4N8_MEDTR Cellulose synthase; Found in the gene: LotjaGi6g1v0320400 LjG1.1_chr6 63696907 63702276 +
1 domain prediction
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LotjaGi6g1v0320400.4
n.a. Cellulose synthase; TAIR: AT4G18780.1 cellulose synthase family protein; Swiss-Prot: sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP]-forming]; TrEMBL-Plants: tr|A0A072V4N8|A0A072V4N8_MEDTR Cellulose synthase; Found in the gene: LotjaGi6g1v0320400 LjG1.1_chr6 63696907 63702500 +
1 domain prediction
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LotjaGi6g1v0320400.5
n.a. Cellulose synthase; TAIR: AT4G18780.1 cellulose synthase family protein; Swiss-Prot: sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP]-forming]; TrEMBL-Plants: tr|A0A1J7HMN5|A0A1J7HMN5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0320400 LjG1.1_chr6 63701002 63702500 +
1 domain prediction
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