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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR27008
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 224 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 0.075s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0002709.1
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356522867|ref|XP_003530064.1| chr0 894057 905814 +
1 domain prediction
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Lj0g3v0002709.2
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356522867|ref|XP_003530064.1| chr0 903962 905325 +
1 domain prediction
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Lj0g3v0019189.1
n.a. PREDICTED: probable inactive receptor kinase RLK902-like [Cicer arietinum] gi|502163215|ref|XP_004512763.1| chr0 7588157 7590806 +
1 domain prediction
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Lj0g3v0019209.1
n.a. PREDICTED: probable inactive receptor kinase RLK902-like [Cicer arietinum] gi|502163215|ref|XP_004512763.1| chr0 7596646 7599369 -
1 domain prediction
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Lj0g3v0043799.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356541594|ref|XP_003539259.1| chr0 14384170 14387274 -
1 domain prediction
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Lj0g3v0055039.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr0 17639362 17641296 +
1 domain prediction
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Lj0g3v0073209.1
n.a. MAP/microtubule affinity-regulating kinase [Medicago truncatula] gi|357515927|ref|XP_003628252.1| chr0 27410480 27412917 +
1 domain prediction
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Lj0g3v0073219.1
n.a. MAP/microtubule affinity-regulating kinase [Medicago truncatula] gi|357515927|ref|XP_003628252.1| chr0 27410480 27413667 +
1 domain prediction
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Lj0g3v0086719.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 4-like [Glycine max] gi|356559929|ref|XP_003548248.1| chr0 35046088 35050220 -
1 domain prediction
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Lj0g3v0094379.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like [Cicer arietinum] gi|502089636|ref|XP_004488972.1| chr0 39687402 39688169 +
1 domain prediction
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Lj0g3v0094389.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like [Cicer arietinum] gi|502089636|ref|XP_004488972.1| chr0 39688550 39691233 +
1 domain prediction
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Lj0g3v0115709.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356537708|ref|XP_003537367.1| chr0 50859370 50863385 +
1 domain prediction
 –
Lj0g3v0133349.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK-like [Glycine max] gi|356554450|ref|XP_003545559.1| chr0 61036614 61039554 -
1 domain prediction
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Lj0g3v0154969.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502122129|ref|XP_004497593.1| chr0 72620171 72621223 +
1 domain prediction
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Lj0g3v0161519.1
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356499089|ref|XP_003518376.1| chr0 75992903 75996790 -
1 domain prediction
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Lj0g3v0162109.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502180487|ref|XP_004516649.1| chr0 76398426 76402109 +
1 domain prediction
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Lj0g3v0207289.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250-like [Glycine max] gi|356509988|ref|XP_003523723.1| chr0 103515481 103517935 +
1 domain prediction
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Lj0g3v0226789.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502096406|ref|XP_004490727.1| chr0 117184368 117185511 -
1 domain prediction
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Lj0g3v0236019.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502096406|ref|XP_004490727.1| chr0 122317361 122318761 +
1 domain prediction
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Lj0g3v0250789.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357436695|ref|XP_003588623.1| chr0 130005562 130006239 -
1 domain prediction
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Lj0g3v0268889.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250-like [Cicer arietinum] gi|502152807|ref|XP_004509103.1| chr0 139301442 139305142 -
1 domain prediction
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Lj0g3v0268899.1
n.a. n.a. chr0 139303435 139305142 +
1 domain prediction
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Lj0g3v0291629.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356573811|ref|XP_003555049.1| chr0 151322489 151325256 -
1 domain prediction
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Lj0g3v0308309.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356551470|ref|XP_003544098.1| chr0 160978563 160981283 -
1 domain prediction
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Lj0g3v0328559.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum] gi|502122925|ref|XP_004497940.1| chr0 171728076 171731884 -
1 domain prediction
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Lj0g3v0328979.1
n.a. n.a. chr0 171974264 171979359 +
1 domain prediction
 –
Lj0g3v0328989.1
n.a. Atypical receptor-like kinase MARK [Medicago truncatula] gi|357521691|ref|XP_003631134.1| chr0 171974641 171976493 -
1 domain prediction
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Lj0g3v0328989.2
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356512960|ref|XP_003525182.1| chr0 171974641 171979687 -
1 domain prediction
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Lj0g3v0333829.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502096406|ref|XP_004490727.1| chr0 174724986 174726946 +
1 domain prediction
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Lj0g3v0346099.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Fragaria vesca subsp]. vesca] gi|470101852|ref|XP_004287382.1| chr0 181531041 181534267 +
1 domain prediction
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Lj0g3v0356809.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Glycine max] gi|356495063|ref|XP_003516400.1| chr0 187910217 187913635 -
1 domain prediction
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Lj0g3v0359399.1
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356512960|ref|XP_003525182.1| chr0 189220900 189221934 +
1 domain prediction
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Lj1g3v0415090.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Glycine max] gi|356518991|ref|XP_003528158.1| chr1 5130270 5133165 -
1 domain prediction
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Lj1g3v0934380.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356507598|ref|XP_003522551.1| chr1 11730957 11733726 +
1 domain prediction
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Lj1g3v1113880.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502136730|ref|XP_004502808.1| chr1 13953318 13969716 +
1 domain prediction
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Lj1g3v1686670.1
n.a. Disease resistance protein [Medicago truncatula] gi|357465601|ref|XP_003603085.1| chr1 19998154 20002147 -
1 domain prediction
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Lj1g3v1991630.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519095|ref|XP_003629836.1| chr1 23470386 23474214 -
1 domain prediction
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Lj1g3v2377960.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356521068|ref|XP_003529180.1| chr1 28075457 28079707 +
1 domain prediction
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Lj1g3v2377960.2
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357506189|ref|XP_003623383.1| chr1 28075457 28082926 +
1 domain prediction
 –
Lj1g3v2536060.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356566806|ref|XP_003551618.1| chr1 29149727 29155785 -
1 domain prediction
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Lj1g3v3464950.1
n.a. Transmembrane kinase-like 1 isoform 1 [Theobroma cacao] gi|508702106|gb|EOX94002.1| chr1 40251224 40254198 +
1 domain prediction
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Lj1g3v4693100.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502111675|ref|XP_004494131.1| chr1 55784172 55787477 -
1 domain prediction
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Lj2g3v0561100.1
n.a. Nodulation receptor kinase [Medicago truncatula] gi|357499011|ref|XP_003619794.1| chr2 7443803 7447081 -
1 domain prediction
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Lj2g3v0561100.2
n.a. Nodulation receptor kinase [Medicago truncatula] gi|357499011|ref|XP_003619794.1| chr2 7443803 7447081 -
1 domain prediction
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Lj2g3v0914400.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK-like [Glycine max] gi|356511425|ref|XP_003524427.1| chr2 14206377 14209827 -
1 domain prediction
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Lj2g3v2002570.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357481915|ref|XP_003611243.1| chr2 30362464 30365880 +
1 domain prediction
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Lj2g3v2087830.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Cicer arietinum] gi|502139102|ref|XP_004503646.1| chr2 31369191 31372833 +
1 domain prediction
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Lj2g3v2173010.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502095698|ref|XP_004490516.1| chr2 32631536 32632712 -
1 domain prediction
 –
Lj2g3v2173020.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356498894|ref|XP_003518282.1| chr2 32631709 32634679 -
1 domain prediction
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Lj2g3v2843040.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr2 36979496 36982698 -
1 domain prediction
 –