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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0086719 |
| Transcript ID | Lj0g3v0086719.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: somatic embryogenesis receptor kinase 4-like [Glycine max] gi|356559929|ref|XP_003548248.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 187 | 187 | 0 | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 187 | 187 | 0 | – | |
| Phobius | 3 | 18 | 16 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 19 | 26 | 8 | – | – | |
| SUPERFAMILY | 25 | 235 | 211 | 1.32E-43 | ||
| Pfam | 27 | 67 | 41 | 1.60E-09 | ||
| Phobius | 27 | 311 | 285 | – | – | |
| Gene3D | 28 | 237 | 210 | 3.30E-52 | ||
| Pfam | 167 | 226 | 60 | 1.20E-07 | ||
| PANTHER | 210 | 676 | 467 | 0 | – | |
| PANTHER | 210 | 676 | 467 | 0 | – | |
| Gene3D | 296 | 342 | 47 | 5.70E-08 | ||
| TMHMM | 311 | 333 | 23 | – | – | |
| Phobius | 312 | 334 | 23 | – | – | |
| Phobius | 335 | 683 | 349 | – | – | |
| SUPERFAMILY | 389 | 675 | 287 | 1.71E-54 | ||
| Gene3D | 389 | 424 | 36 | 5.70E-08 | ||
| SMART | 411 | 683 | 273 | 5.90E-12 | ||
| ProSiteProfiles | 411 | 683 | 273 | 28.81 | ||
| Pfam | 415 | 675 | 261 | 6.10E-38 | ||
| Gene3D | 425 | 477 | 53 | 2.60E-14 | – | |
| Gene3D | 478 | 674 | 197 | 1.70E-29 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj0g3v0086719.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0086719.1, powered by CORGI.
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