Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0328989.2

Overview

Field Value
Gene ID Lj0g3v0328989
Transcript ID Lj0g3v0328989.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356512960|ref|XP_003525182.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 19 19 – –
Phobius
TRANSMEMBRANE
20 39 20 – –
TMHMM
TMhelix
20 39 20 – –
Phobius
CYTOPLASMIC_DOMAIN
40 365 326 – –
PANTHER
PTHR27008:SF19
59 359 301 5.20E-242 –
PANTHER
PTHR27008
59 359 301 5.20E-242 –
ProSiteProfiles
PS50011
74 343 270 33.46
IPR000719
Pfam
PF00069
77 338 262 4.50E-39
IPR000719
SUPERFAMILY
SSF56112
78 338 261 4.02E-62
IPR011009
Gene3D
G3DSA:3.30.200.20
80 149 70 1.20E-16 –
ProSitePatterns
PS00107
80 102 23 –
IPR017441
CDD
cd14066
80 343 264 1.22E-87 –
Gene3D
G3DSA:1.10.510.10
150 358 209 7.50E-37 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0328989.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0328989.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.