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Lj1g3v0415090.1

Overview

Field Value
Gene ID Lj1g3v0415090
Transcript ID Lj1g3v0415090.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable inactive receptor kinase At2g26730-like [Glycine max] gi|356518991|ref|XP_003528158.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 6 6
SignalP 1 22 22
Phobius 1 22 22
PANTHER 1 580 580 3.10E-287
PANTHER 1 580 580 3.10E-287
SignalP 1 20 20
Phobius 7 18 12
Phobius 19 22 4
Phobius 23 251 229
Gene3D 30 211 182 1.30E-31
SUPERFAMILY 53 212 160 6.43E-27
TMHMM 252 271 20
Phobius 252 271 20
Phobius 272 582 311
ProSiteProfiles 355 582 228 20.33
Gene3D 358 415 58 8.70E-10
SUPERFAMILY 359 571 213 2.35E-38
Pfam 361 545 185 2.40E-18
Gene3D 416 560 145 6.40E-19

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj1g3v0415090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0415090.1, powered by CORGI.

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