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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31071:SF4
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.013s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0200949.1
n.a. Plasma membrane-like protein isoform 1 [Theobroma cacao] gi|508703916|gb|EOX95812.1| chr0 99214067 99215313 +
1 domain prediction
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Lj1g3v5031280.1
n.a. Plasma membrane-like protein isoform 1 [Theobroma cacao] gi|508703916|gb|EOX95812.1| chr1 61303009 61303314 +
1 domain prediction
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Lj1g3v5031290.1
n.a. SKIP interacting protein [Medicago truncatula] gi|358346320|ref|XP_003637217.1| chr1 61304438 61305266 +
1 domain prediction
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Lj1g3v5031300.1
n.a. Plasma membrane-like protein isoform 1 [Theobroma cacao] gi|508703916|gb|EOX95812.1| chr1 61305545 61305890 +
1 domain prediction
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LotjaGi1g1v0789000.1
n.a. Intracellular protein transporter USO1-like protein, putative; TAIR: AT5G41620.1 intracellular protein transporter USO1-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|A0A151UD83|A0A151UD83_CAJCA Uncharacterized protein At5g41620; Found in the gene: LotjaGi1g1v0789000 LjG1.1_chr1 136136549 136140418 +
1 domain prediction
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LotjaGi3g1v0390100.1
n.a. Intracellular protein transporter USO1-like protein, putative; TAIR: AT5G41620.2 intracellular protein transporter USO1-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|A0A0R0FVK0|A0A0R0FVK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0390100 LjG1.1_chr3 78808029 78812184 +
1 domain prediction
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LotjaGi3g1v0390100.2
n.a. Intracellular protein transporter USO1-like protein, putative; TAIR: AT5G41620.1 intracellular protein transporter USO1-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|I1KI11|I1KI11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0390100 LjG1.1_chr3 78808036 78812286 +
1 domain prediction
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