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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31174
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0095200.1
n.a. seed maturation protein [Medicago truncatula] gi|77997745|gb|ABB16353.1| chr1 825809 826585 -
1 domain prediction
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Lj5g3v0988570.1
n.a. Late embryogenesis abundant protein D-34 [Medicago truncatula] gi|357440701|ref|XP_003590628.1| chr5 15410384 15412636 -
1 domain prediction
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Lj5g3v2045990.1
n.a. seed maturation protein [Medicago truncatula] gi|77997745|gb|ABB16353.1| chr5 29420841 29421617 +
1 domain prediction
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LotjaGi3g1v0157600.1
n.a. Seed maturation protein/ Late embryogenesis abundant protein; TAIR: AT3G22500.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|G7ITI2|G7ITI2_MEDTR Seed maturation protein; Found in the gene: LotjaGi3g1v0157600 LjG1.1_chr3 21513364 21516073 -
2 domain predictions
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LotjaGi5g1v0168400.1
n.a. Late embryogenesis abundant D-like protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|G7IDP3|G7IDP3_MEDTR Late embryogenesis abundant D-like protein; Found in the gene: LotjaGi5g1v0168400 LjG1.1_chr5 43120771 43123463 -
2 domain predictions
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LotjaGi5g1v0215600.1
n.a. Late embryogenesis abundant D-like protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|V7BIJ3|V7BIJ3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0215600 LjG1.1_chr5 52129264 52131836 -
2 domain predictions
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LotjaGi5g1v0215600.2
n.a. Late embryogenesis abundant D-like protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|V7BIJ3|V7BIJ3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0215600 LjG1.1_chr5 52129264 52131836 -
2 domain predictions
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LotjaGi5g1v0313100_LC.1
n.a. Seed maturation protein/ Late embryogenesis abundant protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|A0A072VPF7|A0A072VPF7_MEDTR Late embryogenesis abundant D-like protein; Found in the gene: LotjaGi5g1v0313100_LC LjG1.1_chr5 63168886 63170370 +
2 domain predictions
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LotjaGi5g1v0313100_LC.2
n.a. Seed maturation protein/ Late embryogenesis abundant protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|A0A072VPF7|A0A072VPF7_MEDTR Late embryogenesis abundant D-like protein; Found in the gene: LotjaGi5g1v0313100_LC LjG1.1_chr5 63169266 63170041 +
2 domain predictions
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