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IPR042971

Source: InterPro

Description

IPR042971 is a Late embryogenesis abundant protein, SMP subgroup.

<p>LEA (late embryogenesis abundant) proteins were first identified in land plants. Plant LEA proteins have been found to accumulate to high levels during the last stage of seed formation (when a natural desiccation of the seed tissues takes place) and during periods of water deficit in vegetative organs. Later, LEA homologues have also been found in various species [[cite:PUB00088596], [cite:PUB00009713]]. They have been classified into several subgroups in Pfam and according to Bray and Dure [[cite:PUB00088595]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
LotjaGi3g1v0157600.1
– Seed maturation protein/ Late embryogenesis abundant protein; TAIR: AT3G22500.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|G7ITI2|G7ITI2_MEDTR Seed maturation protein; Found in the gene: LotjaGi3g1v0157600
Domains
6
LotjaGi5g1v0168400.1
– Late embryogenesis abundant D-like protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|G7IDP3|G7IDP3_MEDTR Late embryogenesis abundant D-like protein; Found in the gene: LotjaGi5g1v0168400
Domains
5
LotjaGi5g1v0215600.1
– Late embryogenesis abundant D-like protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|V7BIJ3|V7BIJ3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0215600
Domains
6
LotjaGi5g1v0215600.2
– Late embryogenesis abundant D-like protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|V7BIJ3|V7BIJ3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0215600
Domains
7
LotjaGi5g1v0313100_LC.1
– Seed maturation protein/ Late embryogenesis abundant protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|A0A072VPF7|A0A072VPF7_MEDTR Late embryogenesis abundant D-like protein; Found in the gene: LotjaGi5g1v0313100_LC
Domains
6
LotjaGi5g1v0313100_LC.2
– Seed maturation protein/ Late embryogenesis abundant protein; TAIR: AT3G22490.1 Seed maturation protein; Swiss-Prot: sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34; TrEMBL-Plants: tr|A0A072VPF7|A0A072VPF7_MEDTR Late embryogenesis abundant D-like protein; Found in the gene: LotjaGi5g1v0313100_LC
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67