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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31342:SF10
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.016s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0227749.1
n.a. PREDICTED: protein CHUP1, chloroplastic-like [Glycine max] gi|356548369|ref|XP_003542575.1| chr0 117703202 117704672 +
1 domain prediction
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Lj0g3v0281989.1
n.a. PREDICTED: protein CHUP1, chloroplastic-like [Glycine max] gi|356548369|ref|XP_003542575.1| chr0 146210388 146210854 +
1 domain prediction
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Lj0g3v0296969.1
n.a. PREDICTED: protein CHUP1, chloroplastic-like [Glycine max] gi|356548369|ref|XP_003542575.1| chr0 154275533 154276742 -
1 domain prediction
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Lj1g3v4691730.1
n.a. PREDICTED: protein CHUP1, chloroplastic-like [Glycine max] gi|356570802|ref|XP_003553573.1| chr1 55643109 55645394 -
1 domain prediction
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Lj1g3v4691730.2
n.a. PREDICTED: protein CHUP1, chloroplastic-like [Glycine max] gi|356570802|ref|XP_003553573.1| chr1 55643109 55645394 -
1 domain prediction
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LotjaGi1g1v0682600.1
n.a. Protein CHUP1, chloroplastic; TAIR: AT2G36650.1 CHUP1-like protein; Swiss-Prot: sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic; TrEMBL-Plants: tr|V7CZX2|V7CZX2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0682600 LjG1.1_chr1 125000317 125003271 +
1 domain prediction
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LotjaGi1g1v0682600.2
n.a. Protein CHUP1, chloroplastic; TAIR: AT2G36650.1 CHUP1-like protein; Swiss-Prot: sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic; TrEMBL-Plants: tr|V7CZX2|V7CZX2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0682600 LjG1.1_chr1 125000317 125003277 +
1 domain prediction
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LotjaGi5g1v0088800.1
n.a. Protein CHUP1, chloroplastic; TAIR: AT2G36650.1 CHUP1-like protein; Swiss-Prot: sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic; TrEMBL-Plants: tr|A0A0B2SUL5|A0A0B2SUL5_GLYSO Protein CHUP1, chloroplastic; Found in the gene: LotjaGi5g1v0088800 LjG1.1_chr5 15174644 15176827 -
1 domain prediction
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LotjaGi5g1v0088800.2
n.a. Protein CHUP1, chloroplastic; TAIR: AT2G36650.1 CHUP1-like protein; Swiss-Prot: sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic; TrEMBL-Plants: tr|A0A0B2SUL5|A0A0B2SUL5_GLYSO Protein CHUP1, chloroplastic; Found in the gene: LotjaGi5g1v0088800 LjG1.1_chr5 15174782 15176749 -
1 domain prediction
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