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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR34837
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.013s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0046969.1
n.a. Pleckstrin (PH) domain-containing protein isoform 3, partial [Theobroma cacao] gi|508777778|gb|EOY25034.1| chr0 15669076 15672323 -
1 domain prediction
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Lj1g3v0969960.1
n.a. PREDICTED: dentin sialophosphoprotein-like [Cicer arietinum] gi|502136299|ref|XP_004502636.1| chr1 12303269 12319374 -
1 domain prediction
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Lj1g3v0969960.2
n.a. PREDICTED: dentin sialophosphoprotein-like [Cicer arietinum] gi|502136299|ref|XP_004502636.1| chr1 12310625 12319374 -
1 domain prediction
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Lj4g3v3003930.1
n.a. Pleckstrin (PH) domain-containing protein isoform 1 [Theobroma cacao] gi|508777776|gb|EOY25032.1| chr4 39843642 39850717 -
1 domain prediction
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Lj4g3v3003930.2
n.a. PREDICTED: nucleoside diphosphate kinase IV, chloroplastic/mitochondrial-like [Fragaria vesca subsp]. vesca] gi|470125839|ref|XP_004298905.1| chr4 39846050 39850717 -
1 domain prediction
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LotjaGi1g1v0284000.1
n.a. Nipped-B-like protein B; TAIR: AT5G53440.1 LOW protein: zinc finger CCCH domain protein; Swiss-Prot: sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B; TrEMBL-Plants: tr|A0A0B2SGT6|A0A0B2SGT6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0284000 LjG1.1_chr1 69123577 69133857 -
1 domain prediction
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LotjaGi2g1v0441300.1
n.a. Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|P71404|CLPB_HELPY Chaperone protein ClpB; TrEMBL-Plants: tr|I3SRK6|I3SRK6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0441300 LjG1.1_chr2 93762946 93766578 -
1 domain prediction
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LotjaGi2g1v0441300.2
n.a. Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|P71404|CLPB_HELPY Chaperone protein ClpB; TrEMBL-Plants: tr|I3SRK6|I3SRK6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0441300 LjG1.1_chr2 93763366 93765293 -
1 domain prediction
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LotjaGi4g1v0435200.1
n.a. Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q75ZQ2|URED_HALMA Urease accessory protein UreD; TrEMBL-Plants: tr|A0A0R0IFR9|A0A0R0IFR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435200 LjG1.1_chr4 80860216 80868865 -
1 domain prediction
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LotjaGi4g1v0435200.2
n.a. Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q75ZQ2|URED_HALMA Urease accessory protein UreD; TrEMBL-Plants: tr|A0A0R0IFR9|A0A0R0IFR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435200 LjG1.1_chr4 80862164 80866130 -
1 domain prediction
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