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Lj0g3v0062649.1

Overview

Field Value
Gene ID Lj0g3v0062649
Transcript ID Lj0g3v0062649.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cicer arietinum] gi|502148510|ref|XP_004507191.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11595
1 232 232 6.60E-135 –
PANTHER
PTHR11595:SF27
1 232 232 6.60E-135 –
Gene3D
G3DSA:1.20.1050.10
11 66 56 6.50E-04
IPR010987
SUPERFAMILY
SSF47616
11 67 57 1.66E-10
IPR010987
ProSitePatterns
PS00824
107 115 9 –
IPR001326
Coils
Coil
115 135 21 – –
Gene3D
G3DSA:3.30.70.60
137 232 96 8.20E-39
IPR014717
SUPERFAMILY
SSF54984
140 232 93 1.31E-29
IPR014038
CDD
cd00292
142 232 91 3.07E-32
IPR014038
SMART
SM00888
143 232 90 4.90E-34
IPR014038
Pfam
PF00736
145 232 88 1.10E-31
IPR014038
ProSitePatterns
PS00825
221 232 12 –
IPR001326

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003746
Molecular function Translation elongation factor activity Functions in chain elongation during polypeptide synthesis at the ribosome.
Subterm of
GO:0005853
Cellular component Eukaryotic translation elongation factor 1 complex A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma.
Subterm of
GO:0006414
Biological process Translational elongation The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
Subterm of
Part of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0062649.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0062649.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.