Domain Predictions — View

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G3DSA:3.40.1390.10

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005524 View details of GO:0005524 AmiGO InterPro QuickGO	Molecular function	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.	Subterm of GO:0008144 GO:0032559 GO:0035639
GO:0009058 View details of GO:0009058 AmiGO InterPro QuickGO	Biological process	Biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.	Subterm of GO:0008152

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0094799.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like [Cicer arietinum] gi\|502139262\|ref\|XP_004503706.1\|	Domains G3DSA:3.40.1190.10 G3DSA:3.40.1390.10 IPR000713 IPR013221 NON_CYTOPLASMIC_DOMAIN PF01225 PF08245 PTHR23135 PTHR23135:SF16 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53623 SSF63418 SignalP-TM_GRAM_POSITIVE mobidb-lite	17
Lj4g3v2963460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like [Cicer arietinum] gi\|502139262\|ref\|XP_004503706.1\|	Domains G3DSA:3.40.1190.10 G3DSA:3.40.1390.10 G3DSA:3.90.190.20 IPR000713 IPR004101 IPR005761 IPR013221 MF_00208 NON_CYTOPLASMIC_DOMAIN PF01225 PF02875 PF08245 PTHR23135 PTHR23135:SF16 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53244 SSF53623 SSF63418 SignalP-TM_GRAM_POSITIVE TIGR01085 mobidb-lite	24
LotjaGi4g1v0427200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; TAIR: AT1G63680.1 ALBINO OR PALE-GREEN 13; Swiss-Prot: sp\|Q03523\|MURE_BACSU UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; TrEMBL-Plants: tr\|A0A072U5D4\|A0A072U5D4_MEDTR UDP-N-acetylmuramyl-tripeptide synthetase; Found in the gene: LotjaGi4g1v0427200	Domains G3DSA:3.40.1190.10 G3DSA:3.40.1390.10 G3DSA:3.90.190.20 IPR000713 IPR004101 IPR005761 IPR013221 IPR035911 IPR036565 IPR036615 MF_00208 NON_CYTOPLASMIC_DOMAIN PF01225 PF02875 PF08245 PTHR23135 PTHR23135:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53244 SSF53623 SSF63418 SignalP-TM TIGR01085 mobidb-lite	27

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33