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IPR000167 is a Dehydrin.
<p>LEA (late embryogenesis abundant) proteins were first identified in land plants. Plant LEA proteins have been found to accumulate to high levels during the last stage of seed formation (when a natural desiccation of the seed tissues takes place) and during periods of water deficit in vegetative organs. Later, LEA homologues have also been found in various species [[cite:PUB00088596], [cite:PUB00009713]]. They have been classified into several subgroups in Pfam and according to Bray and Dure [[cite:PUB00088595]].</p> <p>Dehydrin has been classified as part of the LEA family (D-11 from Dure, or group 2 from Bray) [[cite:PUB00088595]]. Dehydrins contribute to freezing stress tolerance in plants and it was suggested that this could be partly due to their protective effect on membranes [[cite:PUB00015239]].</p> <p>Dehydrins share a number of structural features. One of the most notable features is the presence, in their central region, of a continuous run of five to nine serines followed by a cluster of charged residues. Such a region has been found in all known dehydrins so far with the exception of pea dehydrins. A second conserved feature is the presence of two copies of a lysine-rich octapeptide; the first copy is located just after the cluster of charged residues that follows the poly-serine region and the second copy is found at the C-terminal extremity.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to water | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Dehydrin 8 [Malus domestica] gi|382948207|gb|AFG33218.1| | 8 | ||
| – | Dehydrin; TAIR: AT1G20440.1 cold-regulated 47; Swiss-Prot: sp|P31168|COR47_ARATH Dehydrin COR47; TrEMBL-Plants: tr|I3T800|I3T800_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0001300 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 50.00 |