Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR000961

Description

IPR000961 is a AGC-kinase, C-terminal.

<p>The AGC (cAMP-dependent, cGMP-dependent and protein kinase C) protein kinase family embraces a collection of protein kinases that display a high degree of sequence similarity within their respective kinase domains. AGC kinase proteins are characterised by three conserved phosphorylation sites that critically regulate their function. The first one is located in an activation loop in the centre of the kinase domain. The two other phosphorylation sites are located outside the kinase domain in a conserved region on its C-terminal side, the AGC-kinase C-terminal domain. These sites serves as phosphorylation-regulated switches to control both intra- and inter-molecular interactions. Without these priming phosphorylations, the kinases are catalytically inactive [[cite:PUB00043770], [cite:PUB00043771], [cite:PUB00043772]].</p> <p>Several structures of the AGC-kinase C-terminal domain have been solved. The first phosphorylation site is located in a turn motif, the second one at the end of the domain in an hydrophobic pocket. In PKB the phosphorylated hydrophobic motif engages a hydrophobic groove within the N-lobe of the kinase domain which orders α helices close to the active site [[cite:PUB00022308]].</p> <p>Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity [[cite:PUB00005115]]:</p> <ul> <li>Serine/threonine-protein kinases</li> <li>Tyrosine-protein kinases</li> <li>Dual specificity protein kinases (e.g. MEK -phosphorylates both Thr and Tyr on target proteins)</li> </ul> <p>Protein kinase function is evolutionarily conserved from Escherichia coli to human [[cite:PUB00020114]]. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation [[cite:PUB00015362]]. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [[cite:PUB00034898]], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases [[cite:PUB00034899]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Associated Lotus transcripts 36

Transcript Name Description Predicted domains Domain count
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356564186|ref|XP_003550337.1| 21
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356564186|ref|XP_003550337.1| 21
PREDICTED: serine/threonine-protein kinase OXI1-like [Glycine max] gi|356503073|ref|XP_003520336.1| 15
Kinase superfamily protein isoform 1 [Theobroma cacao] gi|508774145|gb|EOY21401.1| 18
Ser/Thr protein kinase [Lotus japonicus] gi|62857016|dbj|BAD95893.1| 12
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356545884|ref|XP_003541363.1| 21
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356507026|ref|XP_003522272.1| 20
PREDICTED: serine/threonine-protein kinase 38-like isoform X1 [Cicer arietinum] gi|502110070|ref|XP_004493792.1| 17
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356576521|ref|XP_003556379.1| 15
PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Glycine max] gi|356551817|ref|XP_003544270.1| 20
PREDICTED: protein kinase PVPK-1-like [Cicer arietinum] gi|502155213|ref|XP_004509995.1| 13
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356507026|ref|XP_003522272.1| 20
PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Cicer arietinum] gi|502152192|ref|XP_004508809.1| 24
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356533751|ref|XP_003535423.1| 24
PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356558379|ref|XP_003547484.1| 20
Protein kinase; TAIR: AT4G33080.2 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q6TGC6|CBK1_PNECA Serine/threonine-protein kinase CBK1; TrEMBL-Plants: tr|I1JTZ3|I1JTZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0368700 18
Protein kinase; TAIR: AT3G08720.1 serine/threonine protein kinase 2; Swiss-Prot: sp|Q39030|KPK2_ARATH Serine/threonine-protein kinase AtPK2/AtPK19; TrEMBL-Plants: tr|A0A1J7HDN6|A0A1J7HDN6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0458000 18
Protein kinase; TAIR: AT3G08720.1 serine/threonine protein kinase 2; Swiss-Prot: sp|Q39030|KPK2_ARATH Serine/threonine-protein kinase AtPK2/AtPK19; TrEMBL-Plants: tr|A0A1J7HDN6|A0A1J7HDN6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0458000 18
Kinase family protein; TAIR: AT2G20470.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q15208|STK38_HUMAN Serine/threonine-protein kinase 38; TrEMBL-Plants: tr|A0A1J7FX46|A0A1J7FX46_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0707500 19
Kinase family protein; TAIR: AT2G20470.3 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q15208|STK38_HUMAN Serine/threonine-protein kinase 38; TrEMBL-Plants: tr|A0A151R4G0|A0A151R4G0_CAJCA Serine/threonine-protein kinase CBK1; Found in the gene: LotjaGi1g1v0707500 21
Kinase, putative; TAIR: AT3G17850.1 Protein kinase superfamily protein; Swiss-Prot: sp|F4J6F6|IREH1_ARATH Probable serine/threonine protein kinase IREH1; TrEMBL-Plants: tr|K7LEH0|K7LEH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0195000 18
Kinase, putative; TAIR: AT3G17850.1 Protein kinase superfamily protein; Swiss-Prot: sp|F4J6F6|IREH1_ARATH Probable serine/threonine protein kinase IREH1; TrEMBL-Plants: tr|K7LEH0|K7LEH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0195000 16
Kinase, putative; TAIR: AT3G17850.1 Protein kinase superfamily protein; Swiss-Prot: sp|F4J6F6|IREH1_ARATH Probable serine/threonine protein kinase IREH1; TrEMBL-Plants: tr|K7LEH0|K7LEH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0195000 18
Kinase family protein; TAIR: AT3G20830.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q9LT38|UNCL_ARATH Serine/threonine-protein kinase UCNL; TrEMBL-Plants: tr|V7BWR1|V7BWR1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0289300 18
Protein kinase family protein; TAIR: AT5G09890.1 Protein kinase family protein; Swiss-Prot: sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like; TrEMBL-Plants: tr|A0A0R0FHW6|A0A0R0FHW6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0027800 21
Protein kinase; TAIR: AT5G09890.1 Protein kinase family protein; Swiss-Prot: sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like; TrEMBL-Plants: tr|A0A0R0FHW6|A0A0R0FHW6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0027800 19
Kinase family protein; TAIR: AT3G25250.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q9LSF1|OXI1_ARATH Serine/threonine-protein kinase OXI1; TrEMBL-Plants: tr|A0A151QVJ0|A0A151QVJ0_CAJCA Serine/threonine-protein kinase OXI1; Found in the gene: LotjaGi5g1v0117500 12
Kinase family protein; TAIR: AT2G20470.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q6TGC6|CBK1_PNECA Serine/threonine-protein kinase CBK1; TrEMBL-Plants: tr|A0A0R0HP14|A0A0R0HP14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0156800 22
Kinase family protein; TAIR: AT2G20470.3 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q6TGC6|CBK1_PNECA Serine/threonine-protein kinase CBK1; TrEMBL-Plants: tr|A0A072VLK6|A0A072VLK6_MEDTR AGC kinase; Found in the gene: LotjaGi5g1v0156800 22
Kinase family protein; TAIR: AT2G20470.3 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q6TGC6|CBK1_PNECA Serine/threonine-protein kinase CBK1; TrEMBL-Plants: tr|A0A072VLK6|A0A072VLK6_MEDTR AGC kinase; Found in the gene: LotjaGi5g1v0156800 22
Kinase family protein; TAIR: AT2G20470.3 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q6TGC6|CBK1_PNECA Serine/threonine-protein kinase CBK1; TrEMBL-Plants: tr|A0A072VLK6|A0A072VLK6_MEDTR AGC kinase; Found in the gene: LotjaGi5g1v0156800 26
Kinase family protein; TAIR: AT4G14350.3 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q6TGC6|CBK1_PNECA Serine/threonine-protein kinase CBK1; TrEMBL-Plants: tr|A0A0L9TZH4|A0A0L9TZH4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0190300 20
Kinase family protein; TAIR: AT4G14350.3 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like; TrEMBL-Plants: tr|Q53VE2|Q53VE2_LOTJA Ser/Thr protein kinase; Found in the gene: LotjaGi6g1v0004700 22
Kinase family protein; TAIR: AT4G14350.3 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like; TrEMBL-Plants: tr|Q53VE2|Q53VE2_LOTJA Ser/Thr protein kinase; Found in the gene: LotjaGi6g1v0004700 22
Kinase family protein; TAIR: AT4G14350.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like; TrEMBL-Plants: tr|Q53VE2|Q53VE2_LOTJA Ser/Thr protein kinase; Found in the gene: LotjaGi6g1v0004700 20
Kinase family protein; TAIR: AT2G19400.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Swiss-Prot: sp|Q54IH8|NDRB_DICDI Probable serine/threonine-protein kinase ndrB; TrEMBL-Plants: tr|K7MBZ6|K7MBZ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0228600 18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.78