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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1211830 |
| Transcript ID | Lj6g3v1211830.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356558379|ref|XP_003547484.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 44 | 44 | – | – | |
| Coils | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 272 | 272 | 0 | – | |
| PANTHER | 1 | 272 | 272 | 0 | – | |
| Gene3D | 108 | 202 | 95 | 4.10E-33 | – | |
| SUPERFAMILY | 117 | 267 | 151 | 3.78E-87 | ||
| CDD | 118 | 493 | 376 | 0 | – | |
| ProSiteProfiles | 120 | 428 | 309 | 46.506 | ||
| SMART | 120 | 428 | 309 | 5.00E-100 | ||
| Pfam | 122 | 270 | 149 | 1.10E-43 | ||
| ProSitePatterns | 126 | 149 | 24 | – | ||
| Gene3D | 203 | 266 | 64 | 3.80E-63 | – | |
| ProSitePatterns | 239 | 251 | 13 | – | ||
| PANTHER | 308 | 505 | 198 | 0 | – | |
| PANTHER | 308 | 505 | 198 | 0 | – | |
| Gene3D | 318 | 474 | 157 | 3.80E-63 | – | |
| SUPERFAMILY | 319 | 494 | 176 | 3.78E-87 | ||
| Pfam | 321 | 428 | 108 | 4.30E-19 | ||
| ProSiteProfiles | 429 | 502 | 74 | 12.601 | ||
| SMART | 429 | 494 | 66 | 5.00E-06 | ||
| MobiDBLite | 506 | 533 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1211830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1211830.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.