Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR001597 is a Aromatic amino acid beta-eliminating lyase/threonine aldolase.
<p>This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
| Molecular function | Lyase activity | Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: L-allo-threonine aldolase-like [Glycine max] gi|356576676|ref|XP_003556456.1| | 8 | ||
| – | PREDICTED: L-allo-threonine aldolase-like [Glycine max] gi|356576676|ref|XP_003556456.1| | 8 | ||
| – | PREDICTED: L-allo-threonine aldolase-like [Glycine max] gi|356576676|ref|XP_003556456.1| | 8 | ||
| – | PREDICTED: L-allo-threonine aldolase-like [Glycine max] gi|356505991|ref|XP_003521772.1| | 13 | ||
| – | PREDICTED: L-allo-threonine aldolase-like [Glycine max] gi|356576676|ref|XP_003556456.1| | 12 | ||
| – | L-allo-threonine aldolase [Medicago truncatula] gi|357441389|ref|XP_003590972.1| | 13 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|K7N506|K7N506_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0335400_LC | 11 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I3STQ7|I3STQ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0784900 | 13 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I3STQ7|I3STQ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0784900 | 13 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I3STQ7|I3STQ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0784900 | 13 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I3STQ7|I3STQ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0784900 | 13 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I3STQ7|I3STQ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0784900 | 13 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I1NIN3|I1NIN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0208600 | 12 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I1NIN3|I1NIN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0208600 | 12 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|V7BDV5|V7BDV5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0208600 | 10 | ||
| – | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|V7BDV5|V7BDV5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0208600 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF53383 | SUPERFAMILY | 1 | 6.25 |