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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0784900 |
| Transcript ID | LotjaGi1g1v0784900.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I3STQ7|I3STQ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0784900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135745052..135749680) extracted from Lotus japonicus Gifu genome v1.2.
GAGACTGCAACATTGTCACTATGCAAGTTCACATATAGTAAAAAACAGATACTTGTAATGACCTCAAGAACAATATGAAT CCTTCCTTCTTCCACATATAATTGTAGTATAATCGCATGCAAATGCAACTCAGTTCAAAGTGGCCTGCTTGATACATCTC AACTATATTACTTGCGCTCTTCTTGGAGTAAGTATGTAATTAATTCCGGAGTTGGTTTTGTTCCTTTCTCTGCCACTGAC TCTCTGTGATAGAAAAACAAAACATTAACTGCATCTTTATAAGTCATGATGCTGGGATTTTCAAAAGCTAAGAACTAGAG TACAAAATTATACCAAGATCTTGACTGAACTTTAATAGTTACCTTGTATTGTATGCCTCATGTTCTTTTCAGCTTATATA TGATAATTTCTTTTTCCTGTGATTTTTGGGCTTGTTGGTTAAATTGAGAGCAATTAGTTTCTTATGTTTTTTTCTTATGT TTTTTTGTTTTTCCTTAGCTGGGCAACATTTCTGCTTCAGATATTTTGTTAAACATTCTAGTTCAGTCAATCTTTTATTG AATTTTTGTCCAACTTGAAGTAGAAGAGCTTGATCCTATAATGCTCTCTTCCTCCTTTTACTTGTGTTTACTGTTTTATT TGCTTGAATTCTCAAGCGTCTCATAATTATAGAATATGAATCCATTTATCCAATAAAGGTTGAGGAGAAATGTCACAGTA ATCATCAATTTGTATAAAATATCTAGGAAAATGATTTGTGGACATCAACATAGTACAGACACCCTGCAGATACCAGAGTG AGAATGAAAGAGAAGTGAGAGATATATAGATGTGATATATGTTGTGATGTCGATAAGAAAAGAGAGATATAAATGAGGTG TATGTGGGGTGTCTAACTGTTTGAATGCCTAATTATCATAACTGAAATATCTAATTTGGTTTGATGATTCAAGTTTTGTA GTTAATGCAGGTGTTTTGAATGGTATCTGATATGAATTTTGACATTTACTTTTTAGCTTGCTTTTGTTCCACAGAAAATG GCAACTAGGACAGTAGATCTCAGGTCAGATACAGTCACAAAGCCAACTGAAGCAATGCGAACTGCCATGGCAAATGCTGA TGTTGATGACGATGTTCTGGGCCATGATCCGACCTGTTTTCGATTAGAAACCGAGATGGCAAAGATAATGGGCAAAGAAG CTGCTCTTTTTGTTCCATCAGGCACTATGGCAAACCTAATATCTGTGCTTGTCCATTGTGATATCAGGGGAAGTGAAGTT ATTCTTGGAGACAATTCCCATATCCATATTTATGAGAATGGAGGCATTGCAACTATTGGAGGGGTGCATCCAAGAACTGT TAGAAACAATGAGGATGGAACTATGGACATTGATTTGATTGAGGCTGCCATCAGAAATCCAAACTTGGAGCTAATTTATC CAACCACAAGGCTTATTTGCTTGGAAAATACTCATGGAAAGTAAGCAATTCTTTTGAATAATGGAAAATGATTCGTTGAA ATCCGCATAGTGCAGACACCCACACCTAGAGTGTGAGAAAGGTAGAGAAGAAAGAGAAGTAATGGATGTTATATGATAAA AAGAGTGAGAAAGAGAGAAAAATGTCTAATTGCTTGGATGCTTAACTATCATTACTGGATCTTAATACTGCCACTGTTTC ATTTTCTTCATTGCACACTGATGCTTTGATATTTCCATGACCTGTGGGTAAAGGTATTATTTATTGTGAAAAATATAAAG TGGTTTTTTTAGGTATGGAGCAGAAGTGTTGCATCTTTAACAATGCAAAATTATAAATCCTCCAATTGTTACATCTTTGG ATTTTAACAGTTCCTTCTTTTCCTAAATTGTTTGAAAGATCCGGCTTGAGAAGCAGTATGAACTATTGATACTTTTTTCC TAAACACAGCTCCGGTGGTAGATGCCTTTCAGTTGAATATACAGAGAGAGTTGGAGAAGTTGCTAAGAAGCACGGATTGA AGCTTCACATTGATGGAGCCCGTATATTTAATGCATCAGTTGTAAGTGAATTTTCTATTTCACTTATAATTTGTTGAAAT CCATAGAATAAGTTACACACTATGACTTTCTTTTATTCTAATTCTTTGAAATTGTTTGTTTTCTCATTGAATATGAATAC TTTTATCAAGCATGTTTAACAAAAATAAATCATTTACCATTTGAATGATTGCATTTGCATGTCAATCCTGAAGTGTTTAG TATGAATTGATTTTAGTCCTTTTAGTACCTGATCAAATTCTTTTATGATATCCTTCGGTTAGAAATACAATATAAAAAAT CATTTGGGATAGTAGGTTCATCACACTGCTATGATATATGGACAACACTTGACAGGAAATGTTGGTTTTCAGGCACTTGG TGTTCCCGTGGATAGGCTTGTTCAAGCAGCTGATTCAGTATCGGTGTGTTTCTCTTTTCCCTTTGTGTTTGGACAAGTTT AATGGAAGGGGCTCTTCTAAAATAACTCTTCTATAAGAAGAGCAAGTAGTTGTGTTACCTTAAACTTACTTAGTTGGTTA AAACAAGGTTATACTTTAGTAAAGGAGAATACATCCTTGTTTTCGCTTTAGAAGTAACTCATTTTAGAGGTTTCTGAGAT TCAAAATGGTTTCTAAGAAGTTCTAGATGATAGGACCAGAATCTGAGAGAGGGAGAAGAGAGGGAATAGGGACAGAGAAG AGAGAACAAAGGGATAGAAGGGGTTTCATTATCTCAACAATATTCAACATATCCCAATTACAAGGTCAATCCCTATTTAT ATGCGTAACACTAGACAACAAATTTAATTGCCAAATTCAAATCAAATTTATGCTGCTGTTATTTAAACAAACCAACTTAT GGTTTCTTTGAATATATGAATCAGGTTTGCCTATCAAAAGGTCTAGGTGCTCCAGTTGGATCAGTTATTGTTGGTTCCAG TAGCTTTATCGCCAAGGTAGTTCAGGGAATATAATTTACAGAAGCTCTATTATTTTTGAAAGAACTTATTATGTGCATAT TTGGAAAATTTTCTACAATTGATTCTAAAGTCAGAATCAGCTCAAGGGAGAAGCTTCTGTGAGTAGCTTACGGGTTTCAA AATTGATTTTGAGTAAAAAGAAGTTGATCCAAACATGCCAGTATATCTGCTATTTCAGGCTAGACGGCTCCGAAAAACCT TAGGTGGTGGAATGAGGCAAGTTGGCATCCTTTGTGCAGCTGCACTTGTTGCTTTACAGGACATTGTTGGAGAGCTTGAA AGTGATCACAAGAAAGCTAGAACTTTGGCTGGTAAATGTCATACAAATTTAACTAGTTCTCATGCAGGGCCTAACTTTAG TCTATTAAAAGAAATTAAGTTTTTTTTTTTTTATTTTCTTCTAAGTGGTACTTGCTTTTCTCATATAAAAATTTCCCCTT CTTATTATAGATGGATTGAATCAAATCAAAGGGCTGAGAGTGGATACCTCTTCTGTGGAAACCAATATTGTAAGTATTTT TAGTAGAGTCCACTGCATGCTCATTATGTCACTTCAGAAGAACTTTTGTGGGATCCTTAATAACTATATTAACTTAAAAA CACCTATAACCTACACTTATTTATATGTAGCCAGAAAGCACTTTAATTAATCTTTGATACCAGGTATATATTGAAATTAA AGAGGGCTCAGGAACTACAGCAGCTAAGCTAAGCAAGGACTTGGAAAACTATGGGGTCCTTCTGATGCCATTGGGCTCAT CAAAGTAATATATTCATATCAAATAACTATTACAATTTTATATGGACAATATGCTATAATAAGGACATCATTTTTTATCT CCCAGAATTAGAGTTGTCTTCCACCACCAAATATCGGATAGTGATGTGCAGTATGCCTTGTCCTGCTTTCAGGTGATGAC TAAAATCGATTAACCTCTCATTTTGTTGTTGTTGTTGTATATATATTTTTTCCTTCTAATTATGGCTAATCATTTTTCTT TTGTTTGAATGCTGCTGCAGCAAGCTGTGAATGGAGTAGGAAATGAAAATGGCAACTAGTGGAAGAATTTGAAATTTGGC AACTCATCACTACTGCATAGAGTACTATCAAAAGATCAAATTCTATTCGGTTATATGAATTATAAATATGAAGATTTGAA TGAGACATGTGATGTATATGATCATGTAATCCAAAATTTCAGTGAAAAGTGAAGTCGTTACTCAGGAACAACCTCTAAAA TCTACTACATTTGTCACATTTTCTCTCTTCTCTCTCTCTCCTGAACCAAACAAAGCATAAGAGTCCTCTACCAGGAAAAT TTACTCTTGCTTCTTTTTTGGTAAGAGAGATTTTCCACATTTTCTGTTATGAAAACCAGAAACCAAACGGTAGTTTCACC ACAAATTATTGGACCTTGGCTTGGGTCCACTGACACTGAGGGTTGTAGTCCTTGTTGTCCGCTATTATTATTAGCACACA GTGCAATGAACTTGGCATTAGGATTTCCATGTTTTACTTTTATCTGAAAAGCACTTTTCATCTTCTGATCATTGATTTGT ATATTCAATTTCCCAAGAGTCGTTTTCATGACTTTCTTGTGTACATGTAGATGGAATGAATAGCCACCT
CDS sequence (LotjaGi1g1v0784900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACTAGGACAGTAGATCTCAGGTCAGATACAGTCACAAAGCCAACTGAAGCAATGCGAACTGCCATGGCAAATGC TGATGTTGATGACGATGTTCTGGGCCATGATCCGACCTGTTTTCGATTAGAAACCGAGATGGCAAAGATAATGGGCAAAG AAGCTGCTCTTTTTGTTCCATCAGGCACTATGGCAAACCTAATATCTGTGCTTGTCCATTGTGATATCAGGGGAAGTGAA GTTATTCTTGGAGACAATTCCCATATCCATATTTATGAGAATGGAGGCATTGCAACTATTGGAGGGGTGCATCCAAGAAC TGTTAGAAACAATGAGGATGGAACTATGGACATTGATTTGATTGAGGCTGCCATCAGAAATCCAAACTTGGAGCTAATTT ATCCAACCACAAGGCTTATTTGCTTGGAAAATACTCATGGAAACTCCGGTGGTAGATGCCTTTCAGTTGAATATACAGAG AGAGTTGGAGAAGTTGCTAAGAAGCACGGATTGAAGCTTCACATTGATGGAGCCCGTATATTTAATGCATCAGTTGCACT TGGTGTTCCCGTGGATAGGCTTGTTCAAGCAGCTGATTCAGTATCGGTTTGCCTATCAAAAGGTCTAGGTGCTCCAGTTG GATCAGTTATTGTTGGTTCCAGTAGCTTTATCGCCAAGGCTAGACGGCTCCGAAAAACCTTAGGTGGTGGAATGAGGCAA GTTGGCATCCTTTGTGCAGCTGCACTTGTTGCTTTACAGGACATTGTTGGAGAGCTTGAAAGTGATCACAAGAAAGCTAG AACTTTGGCTGATGGATTGAATCAAATCAAAGGGCTGAGAGTGGATACCTCTTCTGTGGAAACCAATATTGTATATATTG AAATTAAAGAGGGCTCAGGAACTACAGCAGCTAAGCTAAGCAAGGACTTGGAAAACTATGGGGTCCTTCTGATGCCATTG GGCTCATCAAAAATTAGAGTTGTCTTCCACCACCAAATATCGGATAGTGATGTGCAGTATGCCTTGTCCTGCTTTCAGCA AGCTGTGAATGGAGTAGGAAATGAAAATGGCAACTAG
Protein sequence (LotjaGi1g1v0784900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATRTVDLRSDTVTKPTEAMRTAMANADVDDDVLGHDPTCFRLETEMAKIMGKEAALFVPSGTMANLISVLVHCDIRGSE VILGDNSHIHIYENGGIATIGGVHPRTVRNNEDGTMDIDLIEAAIRNPNLELIYPTTRLICLENTHGNSGGRCLSVEYTE RVGEVAKKHGLKLHIDGARIFNASVALGVPVDRLVQAADSVSVCLSKGLGAPVGSVIVGSSSFIAKARRLRKTLGGGMRQ VGILCAAALVALQDIVGELESDHKKARTLADGLNQIKGLRVDTSSVETNIVYIEIKEGSGTTAAKLSKDLENYGVLLMPL GSSKIRVVFHHQISDSDVQYALSCFQQAVNGVGNENGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 352 | 352 | 1.4E-207 | – | |
| Gene3D | 1 | 254 | 254 | 2.8E-96 | ||
| PANTHER | 1 | 352 | 352 | 1.4E-207 | ||
| PIRSF | 1 | 356 | 356 | 1.6E-137 | ||
| SUPERFAMILY | 6 | 350 | 345 | 1.17E-110 | ||
| CDD | 7 | 343 | 337 | 5.60444E-111 | – | |
| Pfam | 7 | 294 | 288 | 3.8E-96 | ||
| Gene3D | 255 | 351 | 97 | 1.8E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
| Molecular function | Lyase activity | Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring. |
Expression pattern of LotjaGi1g1v0784900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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