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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0208600 |
| Transcript ID | LotjaGi5g1v0208600.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | L-allo-threonine aldolase; TAIR: AT1G08630.1 threonine aldolase 1; Swiss-Prot: sp|Q8RXU4|THA1_ARATH Probable low-specificity L-threonine aldolase 1; TrEMBL-Plants: tr|I1NIN3|I1NIN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0208600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51044629..51049843) extracted from Lotus japonicus Gifu genome v1.2.
GGTTAATTTAGCCGATCATAATAGAGTCTCGTACCAAACAGGTCGGCGGTCACAAGTACGAATTTTACTGCTCCGAATCT TTACCAAACAGGTTGGTTTGATAGTTTTCTCTGTCTTGACTGCGGGCACCATTTCCCCGGTCCTAACCTAAATTTTAACA ACAACAAAAAAACAATATAAGCGTTACAGTAACATTGTACTAAGATAACTACATTATTATCCTTAATTCATAATTCTTTG TGGATTGTGCTTGCGTCCCTATATAAATCTCTCTGCATGCAGCTGAGTTCAGCTGCAATCTTCAGAGTGGACGAAGCTTC CTTGCATTGTTGCATTTCTGCGAGTGCGCGCTGAAGAGACATCACAATCAATCAACTTTGCAATCTCGTTGGACCATCAT CATCATCATCATCTGGTAAATAGATTCATCTCCTTTTTTCAAATTTCATGACTCATGATCCATGATGACACCACCACAAT GCTGTTCCTTTCTCAGCCACTGAATGTGTATTGTATTGGATGAAACAAAGAAAAAAAGTGCTACCTTTTCAATTATTGTT TTTACCCTTTTTGAGGAACAACATCATAAAATTTCAAGAATAACACCAAAAACCCCACACAAACCCTGATTTCTATAGTT CACAGGTTGTCTTGTCTTGCATGCATCACGGTCTTTGCAGGTGTTGTGTTTGTTAGATTGTCTGTGTCTTTTGTGTGGTA TTTATTGTGGGATTTTTCACTTTTCCATAACTCTTGGGAGTAATTGGAATTTGCAACTTTAATTTTGTGTTATTGGAATT GCAGCTTCTGTAATGTTATTGATCTTCTGAATTCTGTTTCTGTGGAAAGGAATTTGGGAAATGATTTAGCTTCTGATAGG AGTTAATCATGTTATTCTCTGTTCCATTCATTCTCTTATTTATTGCTCTGTTATTTTGCTTGAGACACCATTTCTAGATT ACCCCTCCTCTCATTTTGCATGAAAGTTTGTGACTTTTTCTAACCCTTGCCTTTTCTTAGTAGAATTGCTCAATTCAGCA TCTGAATTCTTGGGGAATTCACCTGTTTTCCCCCATTTCTGTTTTGAATTTTTGTTTTAATTTGGACTGGAGAGACTACA AGTGATAGATATGCATGTGCTTCTTGGATTCTTCCTATAATTTGTTGTCCCCCGAATCTCGTGAAAGCTTCGATTTTAAT TGAAATACTGATCATTTTGTACCTTAGGAAACTTGGAGTTTTCCCTCTCTCTTTTTGTCAGTGCAAAATTTTGGAGTGCC TCTCAATTGAAGTTGAAACCTAAGTTGGTGGCAGAGAAATGTCACAGTAAATAAAATTTTGTTTAAAATTGGTTTCAACT TTTAAGTCTTTCTGAATTTCTTTGGTTGCAAATGGAGTTGGTGAGAAATTGAGAGTGGCAATTGATTTTTACTTTTTTGG CTTGTTTTATTTCCAGAGAAAATGGTAGCTAGAATTGTGGATCTTCGGTCAGACACAGTCACAAAGCCGACTGAAACAAT GAGGACTGCTATGGCATTTGCTGAAGTTGATGATGATGTTTTAGGCTTTGACCCAACTGCTTTTCGCTTAGAAGCAGAGA TGGCAAAGAAATTCGGCAAGGAAGCAGCTCTTTTTGTTCCCTCAGGCACTATGTCGAACCTTATATGTGTGCTTGCCCAT TGTGATGTTAGGGGTAGTGAAGTTATTCTTGGGGATAACTGCCATATCTATATCTATGAGAATGGAGGCATTGCAACTAT TGGAGGGGTGCATCCAAGAGTAGTGAAAAATAACAATGATGGAACCATGGACATTGACTTGATTGAGGCTGCTATCAGAG ATCCAAAGGGGGAGCTATTTTATCCATCCACAAAGCTTATTTGCTTGGAAAATACTCACGCAAAGTAAGTAATTTATTTA CAAAAGAATTTCTTTTAGATTCACTTTCATTGTGATCTTAATACCACAATAATTTAAATTTTCAACTTTGTACATGGGTC TTTGATAATTAGTTCTGCCTGCAGAAAAAAGAACTTAGGGTGCGTTTGAATAAACAGCTTCATAGCTGTTTTCTTTGGGT TTTAGAAGTCCTTTCCTGTTGTAAACTGATTCAAAATTCTAGAAGAATTATAACTAATACTTTCCCTGAATTCAGCTCTG GTGGCAGATGCCTTTCAGCTGAATATACAGATAGAGTTGGAGAGGTTGCTAAGAAGCATGGGTTGAAGCTTCACATCGAT GGAGCCCGTATCTTCAATGCATCAGTTGTAAGAAATGTTTTGTTTATTCGTGATTTCTTTAAATTAAATGCCTTGATATA AAGTTTTATTGCGCATCAGATGATTTGGTTTGCTTTGTGAATATATGCATTTGAGTAAATAATATCTCACAGCAAATGGT CTCCAATAATAAACATAGAATGTAGAGAATCATGTCTTTATCGAGTCACTGTAACTGCAATGAAATGTTCAACGTCAGTA TATGCAATTGCCAAGATAGAATATCTCCGGGAAATTTCTGTTAGTTTTCACCTCAGGGGCCTTGTGTTAGGCCCCATAGT AATTTGAGACGGATCAGCTGTAGATAACCGAAGGAGTCCCTTGGTTTTCATTTATCATACTAGAAGTTTTTCTTCTGTTA GAATCCTGATTTTGGCTGTTATTTTTCCATTAGTTGTATTTCTTACCTGCTATTCCTGCAAGGCCTATTCATAGAAAAAG GGAACTGCTTGGAAATATTTACTTCATTTAACCACAACTTCATCTATTGCCCTTTAGTTTCTCCTTCCTGCCAACATATG CAAAGAAATATGGAATCGCTTAACTGAAAATTTGATTTTTCAGGCACTTGGTGTTCCTGTGGATAGGCTTGTCCAAGCTG CTGATTCGGTTTCAGTATGTTTCTCTTTTCCTTTTATCTGGGCTTAAAGATTCAACAAGGCTTCTTGACACTGGCACTTA TTGGAGCTTATTTAGTGCATTTCCTAGTAGATAAGCTCCAATAAGCCCATATCCAAACAGGCTCTGTGTCAATTTATTGA AGAAAGTTTCCGAGGACTAGTTACCTATTTCAAATCAAACTTGGTTACTTCTCCATCCTAGTGAATAATAAAAAATTTAA CTGACTTATACTTCCTTTGAAAATATGATTTAGGTTTGCCTGTCTAAAGGTATAGGTGCTCCGGTTGGATCTGTTATTAT TGGTTCTGAGAACTTTATCGCCAAGGTAGTTCAATTTTTTTGACAGATATTAATGAAAGCTATATTCTTCCTGAATGACC AATATTTAAGTCTAGTTGATATATTTTCTTTTAGGCTAGAGTTCTCCGGAAAGCGTTGGGTGGTGGGATGAGACAGATTG GCATCCTTTGTGCTGCTGCACTTGTTGGGTTACATGAAAATGTTGGAAAGCTGGAAAGTGATCACAAGAATGCTAGAACT TTGGCTGGTAAATGTCTTGCAATTTGAAATGATGCCACATGGTTCAGCATCTGTTTGAGGAATTATAATTTTATTTAAAA GTAAAAATCTTTTTCTTTTGAACTTGCTTTTCTCCTGTAATTTTTTTTCACTTCTTTTCAGATGGACTGAGTGAAATTCG AGGACTCAAAGTCGATGCCAGTTCTGTGGAGACCAATATGGTGAGTATGTATTATAGTGTAACTTATGCTAGTGTAAATG TTTCATTTCTCTGATTACTTTTGCTTTGAAGAATTTTCCATTATTTCTTAAGTTGTGATCATTGCTTAGTTTTTGTCCCT ATTGCCAAGTGCCAACAACTTAAATTATGAGCAAGTATTTGTGAGCTCGGGCTATCATTAGAGCTTTGTACAGATCCATA ACTAAGTCAGATTGAAGGTTCTACAAATGACAATTCTTTATTTATCTGTATCCTAACTGCTAAGTTTTTTCTACCCTTGA TACCAGATATTTATTGGAATCGAAGGTTCATGGACTACAGCAGAAAAGATACGCAAGTACTTGGAAGAACGCAATATCCT TCTGATGAAAGATAGCTCTTCAAGGTCTTGTACTCTTGTTTCAGTTATACCTCTACAATATTCAATCTGTTATAAGTAAT TGAAATAATTGTTAACTTCTAAATTCTGAGACTGTCTGAGATAGTGAGATTTAGTGCACTTAATTATCACAGGAATCAAG CACCCTTTAAAAATGATGTTTCAGTTGCTGTGTTTGTTATCTAGTATCTTCTTTTTTGTGCGTTCAAAATGTCAGAAGAA GATGACCATGTTGATCTTCTCTGTTTTTTTTATTAGTGTAATTTCTTAAGTAAATGTTGTTTATGAATGTGATTCTTTGA CTCTTTCCATATGTGAAGTAATTTATTCATTTAAGATAGATAACTTTTCCACTTTGTGGACAATCTAATAAGAAAGAGGC TGATAACATTTTCTGCTTATTCCAGATTGAGAGTTGTCCTTCACCACCAAATATCAGCAAGTGATGTGCAGTATGCCTTG TCATGCTTTCAGGTGATGAGTTGAAGTCGATTATCCTCTTATTATTTAATAAATTTGTACATCCATGATTAGCCCAGTCT TGAGGAGGAGATAACCCCATCACAATTTCATTAAGCAAAATGCTTAGGACCTGCGAACATCCAGTATTAACCCGGTCTCA ATGAGGTTGTTCTTCAAAGATTATCTCCTCATTGATGTCGGGTTAATATTAGATTTCTCAGTATGTAGACAGCTCTACAA GTCCTAAGCATTTTACTTAATAATCTTTGTTAATCTTTGAAAGATGACCTCACTGAGACCGGGACATGATAGTTCGGTAT GTACAGATTCAATAAGCTTTGTTCTTTTCCTTTAAATAGCATATATTTTAGACATTGTTAGAAGATGAAACTTATTTGTT TTTGTTCAATATTGCAGCAAGCTCTACAATGTGAAAATGGCAATTAGGGGAGGATGGCAGTTTGTTGTCATATTTGTGCA TGGAAAGGGGAATTTCAAATTCCATTTGTCTTTGTCTGTGTTAGTTACTTTGATGTACCCTAAATAAGTACAAGGATTTA CAATGATGTTCCCATTGTGAATAACATCGTTATGAAGCTATTTTGTTTTGGTAGATACATCGTTATGAAGCTAATTAAGC GTATTGACTATTGAATTGCCTTCTGGGTTATTGTTAGGAATAGGGCATTAGTTTTGGTGCCATCTCAGTTGATTCTCATG CCATTCCTTTTTTTC
CDS sequence (LotjaGi5g1v0208600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGCTAGAATTGTGGATCTTCGGTCAGACACAGTCACAAAGCCGACTGAAACAATGAGGACTGCTATGGCATTTGC TGAAGTTGATGATGATGTTTTAGGCTTTGACCCAACTGCTTTTCGCTTAGAAGCAGAGATGGCAAAGAAATTCGGCAAGG AAGCAGCTCTTTTTGTTCCCTCAGGCACTATGTCGAACCTTATATGTGTGCTTGCCCATTGTGATGTTAGGGGTAGTGAA GTTATTCTTGGGGATAACTGCCATATCTATATCTATGAGAATGGAGGCATTGCAACTATTGGAGGGGTGCATCCAAGAGT AGTGAAAAATAACAATGATGGAACCATGGACATTGACTTGATTGAGGCTGCTATCAGAGATCCAAAGGGGGAGCTATTTT ATCCATCCACAAAGCTTATTTGCTTGGAAAATACTCACGCAAACTCTGGTGGCAGATGCCTTTCAGCTGAATATACAGAT AGAGTTGGAGAGGTTGCTAAGAAGCATGGGTTGAAGCTTCACATCGATGGAGCCCGTATCTTCAATGCATCAGTTGCACT TGGTGTTCCTGTGGATAGGCTTGTCCAAGCTGCTGATTCGGTTTCAGTTTGCCTGTCTAAAGGTATAGGTGCTCCGGTTG GATCTGTTATTATTGGTTCTGAGAACTTTATCGCCAAGGCTAGAGTTCTCCGGAAAGCGTTGGGTGGTGGGATGAGACAG ATTGGCATCCTTTGTGCTGCTGCACTTGTTGGGTTACATGAAAATGTTGGAAAGCTGGAAAGTGATCACAAGAATGCTAG AACTTTGGCTGATGGACTGAGTGAAATTCGAGGACTCAAAGTCGATGCCAGTTCTGTGGAGACCAATATGATATTTATTG GAATCGAAGGTTCATGGACTACAGCAGAAAAGATACGCAAGTACTTGGAAGAACGCAATATCCTTCTGATGAAAGATAGC TCTTCAAGATTGAGAGTTGTCCTTCACCACCAAATATCAGCAAGTGATGTGCAGTATGCCTTGTCATGCTTTCAGCAAGC TCTACAATGTGAAAATGGCAATTAG
Protein sequence (LotjaGi5g1v0208600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVARIVDLRSDTVTKPTETMRTAMAFAEVDDDVLGFDPTAFRLEAEMAKKFGKEAALFVPSGTMSNLICVLAHCDVRGSE VILGDNCHIYIYENGGIATIGGVHPRVVKNNNDGTMDIDLIEAAIRDPKGELFYPSTKLICLENTHANSGGRCLSAEYTD RVGEVAKKHGLKLHIDGARIFNASVALGVPVDRLVQAADSVSVCLSKGIGAPVGSVIIGSENFIAKARVLRKALGGGMRQ IGILCAAALVGLHENVGKLESDHKNARTLADGLSEIRGLKVDASSVETNMIFIGIEGSWTTAEKIRKYLEERNILLMKDS SSRLRVVLHHQISASDVQYALSCFQQALQCENGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 351 | 351 | 1.3E-217 | – | |
| PANTHER | 1 | 351 | 351 | 1.3E-217 | ||
| PIRSF | 1 | 354 | 354 | 5.2E-136 | ||
| Gene3D | 2 | 254 | 253 | 3.3E-91 | ||
| SUPERFAMILY | 6 | 348 | 343 | 3.55E-110 | ||
| Pfam | 7 | 293 | 287 | 2.5E-93 | ||
| Gene3D | 256 | 350 | 95 | 4.8E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
| Molecular function | Lyase activity | Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring. |
Expression pattern of LotjaGi5g1v0208600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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