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IPR003582

Description

IPR003582 is a ShKT domain.

<p>BgK, a 37-residue peptide toxin from the sea anemone Bunodosoma granulifera, and ShK, a 35-residue peptide toxin from the sea anemone Stichodactyla helianthus, are potent inhibitors of K channels. There is a large superfamily of proteins that contains domains (referred to as ShKT domains) resembling these two toxins. Many of these proteins are metallopeptidases, whereas others are prolyl-4-hydroxylases, tyrosinases, peroxidases, oxidoreductases, or proteins containing epidermal growth factor-like domains, thrombospondin-type repeats, or trypsin-like serine protease domains [[cite:PUB00068721]]. The ShKT domain has also been called NC6 (nematode six-cysteine) domain [[cite:PUB00068722]], SXC (six-cysteine) domain [[cite:PUB00068722], [cite:PUB00068723], [cite:PUB00068724], [cite:PUB00042675]] and ICR (ion channel regulator) [[cite:PUB00068721], [cite:PUB00033277]]. The ShKT domain is short (36 to 42 amino acids), with six conserved cysteines and a number of other conserved residues. The fold adopted by the ShKT domain contains two nearly perpendicular stretches of helices, with no additional canonical secondary structures [[cite:PUB00036415]]. The globular architecture of the ShKT domain is stabilised by three disulfides, one of them linking the two helices. In venomous creatures, the ShKT domain may have been modified to give rise to potent ion channel blockers, whereas the incorporation of this domain into plant oxidoreductases and prolyl hydroxylases and into worm astacin-like metalloproteases and trypsin-like serine proteases produced enzymes with potential channel-modulatory activity.</p> <p>Some proteins known to contain a ShKT domain are listed below:</p> <ul><li>Caribbean sea anemone ShK, a potassium channel toxin [[cite:PUB00033687]].</li> <li>Sea anemone BgK, a potassium channel toxin [[cite:PUB00036415]].</li> <li>Toxocara canis family of secreted mucins Tc-MUC-1 to -5, which are implicated in immune evasion. They combine two evolutionarily distinct modules, the mucin and ShkT domains [[cite:PUB00068722], [cite:PUB00068723]].</li> <li>Some Caenorhabditis elegans astacin-like proteins (nematode astacins, NAS), metalloproteases [[cite:PUB00042675]].</li> <li>Vertebrate cysteine-rich secretory proteins (Crisp) [[cite:PUB00033277]].</li> <li>Mammalian microfibrillar-associated protein 2 (MFAP2 or MAGP1), a matrix protein.</li> <li>Plant prolyl 4-hydroxylase.</li></ul>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript Name Description Predicted domains Domain count
PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max] gi|356550516|ref|XP_003543632.1| 18
PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Fragaria vesca subsp]. vesca] gi|470147195|ref|XP_004309201.1| 15
PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max] gi|356550516|ref|XP_003543632.1| 18
PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Cicer arietinum] gi|502151204|ref|XP_004508327.1| 15
Prolyl 4-hydroxylase alpha subunit-like protein [Medicago truncatula] gi|357447555|ref|XP_003594053.1| 16
Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT4G25600.3 Oxoglutarate/iron-dependent oxygenase; Swiss-Prot: sp|Q8GXT7|P4H12_ARATH Probable prolyl 4-hydroxylase 12; TrEMBL-Plants: tr|A0A151TED0|A0A151TED0_CAJCA Prolyl 4-hydroxylase subunit alpha-1; Found in the gene: LotjaGi2g1v0140400 8
Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT4G25600.1 Oxoglutarate/iron-dependent oxygenase; Swiss-Prot: sp|Q8GXT7|P4H12_ARATH Probable prolyl 4-hydroxylase 12; TrEMBL-Plants: tr|K7LDR1|K7LDR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0140400 17
Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT3G28480.1 Oxoglutarate/iron-dependent oxygenase; Swiss-Prot: sp|Q8L970|P4H7_ARATH Probable prolyl 4-hydroxylase 7; TrEMBL-Plants: tr|I1LWH3|I1LWH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0254100 19
Prolyl 4-hydroxylase subunit alpha-like protein; TAIR: AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4; TrEMBL-Plants: tr|I3S5N2|I3S5N2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0348100 16
Prolyl 4-hydroxylase subunit alpha-like protein; TAIR: AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4; TrEMBL-Plants: tr|I3S8E5|I3S8E5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303800 17
Prolyl 4-hydroxylase subunit alpha-like protein; TAIR: AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4; TrEMBL-Plants: tr|I3S8E5|I3S8E5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303800 11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SM00702 SMART 1 9.09