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IPR003840

Source: InterPro

Description

IPR003840 is a DNA replication helicase domain.

<p>This entry represents a domain found in viral DNA replication helicases, bacterial ATP-dependent DNA helicase Pif1 and eukaryotic ATP-dependent DNA helicase PIF7.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004386
Molecular function Helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Associated Lotus transcripts 41

Transcript Name Description Predicted domains Domain count
Lj0g3v0061119.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357516567|ref|XP_003628572.1|
Domains
8
Lj0g3v0064349.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357467591|ref|XP_003604080.1|
Domains
6
Lj0g3v0088449.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357491999|ref|XP_003616288.1|
Domains
9
Lj0g3v0281089.1
– DNA repair and recombination protein PIF1 [Medicago truncatula] gi|357506355|ref|XP_003623466.1|
Domains
8
Lj1g3v1147280.1
– DNA repair and recombination protein PIF1 [Medicago truncatula] gi|357495647|ref|XP_003618112.1|
Domains
5
Lj1g3v3328610.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357516567|ref|XP_003628572.1|
Domains
8
Lj1g3v3330280.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357516567|ref|XP_003628572.1|
Domains
9
Lj2g3v1695300.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357491999|ref|XP_003616288.1|
Domains
8
Lj2g3v2087690.1
– DNA repair and recombination protein PIF1 [Medicago truncatula] gi|357487409|ref|XP_003613992.1|
Domains
11
Lj2g3v2571130.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357503771|ref|XP_003622174.1|
Domains
8
Lj3g3v0840430.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357467591|ref|XP_003604080.1|
Domains
6
Lj3g3v1101610.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357516567|ref|XP_003628572.1|
Domains
8
Lj3g3v2318290.1
– DNA repair and recombination protein PIF1 [Medicago truncatula] gi|357495647|ref|XP_003618112.1|
Domains
8
Lj4g3v0228840.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357516567|ref|XP_003628572.1|
Domains
8
Lj4g3v1881080.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357516567|ref|XP_003628572.1|
Domains
8
Lj5g3v1062380.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357516567|ref|XP_003628572.1|
Domains
8
Lj5g3v1811630.1
– ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357505011|ref|XP_003622794.1|
Domains
8
Lj6g3v0925650.1
– PREDICTED: DNA repair and recombination protein pif1, mitochondrial-like [Fragaria vesca subsp]. vesca] gi|470141112|ref|XP_004306279.1|
Domains
15
Lj6g3v0925660.1
– PREDICTED: DNA repair and recombination protein pif1, mitochondrial-like [Fragaria vesca subsp]. vesca] gi|470141112|ref|XP_004306279.1|
Domains
7
LotjaGi1g1v0064200_LC.1
– PIF1-like helicase; TAIR: AT3G51700.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A1J6KAY3|A0A1J6KAY3_NICAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0064200_LC
Domains
11
LotjaGi1g1v0191500_LC.1
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0191500_LC
Domains
10
LotjaGi1g1v0191500_LC.2
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0191500_LC
Domains
10
LotjaGi1g1v0191500_LC.3
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0191500_LC
Domains
10
LotjaGi1g1v0245100_LC.1
– PIF1-like helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A1J6KAY3|A0A1J6KAY3_NICAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0245100_LC
Domains
11
LotjaGi1g1v0376100_LC.1
– DNA helicase homolog, putative; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|Q5W673|Q5W673_ORYSJ Putative helicase; Found in the gene: LotjaGi1g1v0376100_LC
Domains
14
LotjaGi1g1v0533100_LC.1
– DNA helicase homolog, putative; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|Q5W673|Q5W673_ORYSJ Putative helicase; Found in the gene: LotjaGi1g1v0533100_LC
Domains
14
LotjaGi2g1v0071600_LC.1
– PIF1-like helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A1J6KAY3|A0A1J6KAY3_NICAT Uncharacterized protein; Found in the gene: LotjaGi2g1v0071600_LC
Domains
11
LotjaGi2g1v0372900_LC.1
– Helicase-like protein; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A0R0K9R8|A0A0R0K9R8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0372900_LC
Domains
13
LotjaGi2g1v0440700_LC.1
– PIF1-like helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A0D2ZVQ9|A0A0D2ZVQ9_BRAOL Uncharacterized protein; Found in the gene: LotjaGi2g1v0440700_LC
Domains
12
LotjaGi3g1v0023100_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi3g1v0023100_LC
Domains
9
LotjaGi3g1v0160100_LC.1
– PIF1-like helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A1J6KAY3|A0A1J6KAY3_NICAT Uncharacterized protein; Found in the gene: LotjaGi3g1v0160100_LC
Domains
11
LotjaGi3g1v0260000_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|G7J5Q6|G7J5Q6_MEDTR PIF1 helicase; Found in the gene: LotjaGi3g1v0260000_LC
Domains
10
LotjaGi4g1v0032000_LC.2
– PIF1-like helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A1J6KAY3|A0A1J6KAY3_NICAT Uncharacterized protein; Found in the gene: LotjaGi4g1v0032000_LC
Domains
11
LotjaGi4g1v0122400_LC.1
– Helicase-like protein; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|Q5W673|Q5W673_ORYSJ Putative helicase; Found in the gene: LotjaGi4g1v0122400_LC
Domains
14
LotjaGi4g1v0122400_LC.2
– PIF1-like helicase; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|Q2R1R7|Q2R1R7_ORYSJ AT hook motif-containing protein, putative; Found in the gene: LotjaGi4g1v0122400_LC
Domains
11
LotjaGi4g1v0150000_LC.1
– PIF1-like helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A1J6KHL7|A0A1J6KHL7_NICAT Uncharacterized protein; Found in the gene: LotjaGi4g1v0150000_LC
Domains
11
LotjaGi4g1v0174200_LC.1
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q1HG60|PIF1_RAT ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi4g1v0174200_LC
Domains
8
LotjaGi4g1v0276100_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi4g1v0276100_LC
Domains
10
LotjaGi5g1v0076500_LC.1
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q1HG60|PIF1_RAT ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi5g1v0076500_LC
Domains
8
LotjaGi5g1v0143000_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151T5C9|A0A151T5C9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi5g1v0143000_LC
Domains
10
LotjaGi5g1v0355900_LC.1
– DNA helicase homolog, putative; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|Q5W673|Q5W673_ORYSJ Putative helicase; Found in the gene: LotjaGi5g1v0355900_LC
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18809 CDD 1 2.44