Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR23274

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004386
Molecular function Helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Associated Lotus transcripts 20

Transcript Name Description Predicted domains Domain count
Lj6g3v0925650.1
– PREDICTED: DNA repair and recombination protein pif1, mitochondrial-like [Fragaria vesca subsp]. vesca] gi|470141112|ref|XP_004306279.1|
Domains
15
Lj6g3v0925660.1
– PREDICTED: DNA repair and recombination protein pif1, mitochondrial-like [Fragaria vesca subsp]. vesca] gi|470141112|ref|XP_004306279.1|
Domains
7
LotjaGi1g1v0120900_LC.1
– PIF1 helicase; TAIR: AT3G51700.1 PIF1 helicase; Swiss-Prot: sp|Q9H611|PIF1_HUMAN ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151T5C9|A0A151T5C9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0120900_LC
Domains
6
LotjaGi1g1v0120900_LC.2
– PIF1 helicase; TAIR: AT3G51700.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151T5C9|A0A151T5C9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0120900_LC
Domains
6
LotjaGi1g1v0191500_LC.1
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0191500_LC
Domains
10
LotjaGi1g1v0191500_LC.2
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0191500_LC
Domains
10
LotjaGi1g1v0191500_LC.3
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi1g1v0191500_LC
Domains
10
LotjaGi1g1v0250200_LC.1
– PIF1-like helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A072TIZ5|A0A072TIZ5_MEDTR PIF1-like helicase; Found in the gene: LotjaGi1g1v0250200_LC
Domains
7
LotjaGi1g1v0439100_LC.1
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|G7J5Q6|G7J5Q6_MEDTR PIF1 helicase; Found in the gene: LotjaGi1g1v0439100_LC
Domains
5
LotjaGi3g1v0023100_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi3g1v0023100_LC
Domains
9
LotjaGi3g1v0260000_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|G7J5Q6|G7J5Q6_MEDTR PIF1 helicase; Found in the gene: LotjaGi3g1v0260000_LC
Domains
10
LotjaGi4g1v0000400_LC.1
– PIF1 helicase; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi4g1v0000400_LC
Domains
7
LotjaGi4g1v0174200_LC.1
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q1HG60|PIF1_RAT ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi4g1v0174200_LC
Domains
8
LotjaGi4g1v0204900_LC.1
– PIF1-like helicase; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151QS72|A0A151QS72_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi4g1v0204900_LC
Domains
6
LotjaGi4g1v0276100_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi4g1v0276100_LC
Domains
10
LotjaGi5g1v0076500_LC.1
– ATP-dependent DNA helicase PIF1; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q1HG60|PIF1_RAT ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi5g1v0076500_LC
Domains
8
LotjaGi5g1v0143000_LC.1
– PIF1 helicase; TAIR: AT3G51690.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151T5C9|A0A151T5C9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi5g1v0143000_LC
Domains
10
LotjaGi6g1v0170300.1
– ATP-dependent DNA helicase; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q5AXT5|PIF1_EMENI ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A0B2NR92|A0A0B2NR92_GLYSO ATP-dependent DNA helicase; Found in the gene: LotjaGi6g1v0170300
Domains
14
LotjaGi6g1v0170400.1
– ATP-dependent DNA helicase; TAIR: AT3G51700.1 PIF1 helicase; Swiss-Prot: sp|Q5AXT5|PIF1_EMENI ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151RYM0|A0A151RYM0_CAJCA ATP-dependent DNA helicase; Found in the gene: LotjaGi6g1v0170400
Domains
17
LotjaGi6g1v0275600_LC.1
– PIF1 helicase; TAIR: AT5G28780.1 PIF1 helicase; Swiss-Prot: sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1; TrEMBL-Plants: tr|A0A151SYK9|A0A151SYK9_CAJCA ATP-dependent DNA helicase PIF1; Found in the gene: LotjaGi6g1v0275600_LC
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18809 CDD 1 5.00