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IPR004238 is a Late embryogenesis abundant protein ECP63-like domain.
<p>This entry represents a domain found in Late embryogenesis abundant protein ECP63 from Arabidopsis thaliana and similar plant proteins. ECP63, a member of the LEA family, is though to be involved in the BHLH109-mediated regulation of somatic embryogenesis [[cite:PUB00096344]].</p> <p>LEA (late embryogenesis abundant) proteins were first identified in land plants. Plant LEA proteins have been found to accumulate to high levels during the last stage of seed formation (when a natural desiccation of the seed tissues takes place) and during periods of water deficit in vegetative organs. Later, LEA homologues have also been found in various species [[cite:PUB00088596], [cite:PUB00009713]]. They have been classified into several subgroups in Pfam and according to Bray and Dure [[cite:PUB00088595]].</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: embryonic protein DC-8-like [Glycine max] gi|356533407|ref|XP_003535256.1| | 5 | ||
– | PREDICTED: embryonic protein DC-8-like [Glycine max] gi|356533407|ref|XP_003535256.1| | 4 | ||
– | Late embryogenesis abundant protein, putative; TAIR: AT2G36640.1 embryonic cell protein 63; Swiss-Prot: sp|Q9SKP0|ECP63_ARATH Late embryogenesis abundant protein ECP63; TrEMBL-Plants: tr|A0A072U4L9|A0A072U4L9_MEDTR 35 kDa seed maturation protein, putative; Found in the gene: LotjaGi1g1v0681900 | 5 | ||
– | Late embryogenesis abundant protein, putative; TAIR: AT2G36640.1 embryonic cell protein 63; Swiss-Prot: sp|Q9SKP0|ECP63_ARATH Late embryogenesis abundant protein ECP63; TrEMBL-Plants: tr|I1L957|I1L957_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089300 | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 25.00 |