Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR004840 is a Amino acid permease, conserved site.
<p>This entry represents a conserved region located in the second transmembrane segment of amino acid permeases mainly found in bacteria and fungi.</p> <p>Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [[cite:PUB00003402], [cite:PUB00001779], [cite:PUB00005006]]. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Amino acid transport | The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: amino-acid permease BAT1 homolog [Cicer arietinum] gi|502120624|ref|XP_004497026.1| | 10 | ||
| – | Amino acid permease; TAIR: AT2G01170.1 bidirectional amino acid transporter 1; Swiss-Prot: sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog; TrEMBL-Plants: tr|I1LES0|I1LES0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273400 | 13 | ||
| – | Amino acid permease; TAIR: AT2G01170.1 bidirectional amino acid transporter 1; Swiss-Prot: sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog; TrEMBL-Plants: tr|I1NFQ4|I1NFQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0334900 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| TRANSMEMBRANE | Phobius | 1 | 33.33 |