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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0273400 |
| Transcript ID | LotjaGi2g1v0273400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid permease; TAIR: AT2G01170.1 bidirectional amino acid transporter 1; Swiss-Prot: sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog; TrEMBL-Plants: tr|I1LES0|I1LES0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74479619..74486236) extracted from Lotus japonicus Gifu genome v1.2.
TTAAATCCCGGTAAAAACATTCTTTTAGGTACATGCAACCGTTTTCTGAATCAACAACGAAAAAATTAAACTGTGCATTT GCTAGAGAATTTTAGCAACATTTAAACAGTTTTGAGAGAATTGACTGAGGAAAATGAAATAATGTGGTTCAAGAAGTACG TACGTATTCACGTGTGTTGTTTGGACTGTTAGTTAGAGGGTGAGAACGCTTTTGTTTGTTATATAGCAATAGTAGCTCAA GTTCAACTAAGAAACTAGCAAACCCAGGTAAAGGAATGGGAAGAAGCAGTAGAAGAGTTCAATTCCCAGAAGAAGATGGA GATCCCTATCTTCCTCTCTGCCCCAGAGACACCACCTCCACATCACAATCACACGGTTCCTCCCAAGACCTGCGTCTGAA TCAACTCGGTTACAAGCAAGAACTTCGCCGCAACTTATCGTAAGCTTCACAACAGTGACTCTAACTCACACTTGAATTCT CAACATAATTGAATGCGCGCACGCATGCATGCAGGGCAATAGCGAACTTCTCGATGACCTTTTCGATTGTGTCAATAATG ACCGGGCTGACGACGTTGTACGGGACGGGGCTGAGATTCGGAGGGCCGGCGAGCATGGTGTACGGGTGGTGGGTGGTTGG TGCTCTCACAATGGCGGTGGGTCTGTCCATGGCTGAGATCTGTTCGGCGTACCCGACCTCCGGCGGGCTTTACTTTTGGA GCGCCAGGTTGTGCCGCTCTCACTCCGCGGCTCCCTTCGCTGCTTGGCTCACTGGCTGGTCTGTATTCTTCTTCTTCATT TGTTTTCTTGCCCACTTGGTGGTTCTGATTTTGATTTTAATAAGGAATGCCTCTCACGTACTTTGACCATGTCATCTACT GACTACTAGCATCAAAGTCTCACATAACATTTTATAAAAGTTTGACCAAAATTCTAATTTTGAATATAATAATTATAATA AAAAATATTTAATTAAATCATAATTGACATAGAGGTTCAACACTTAATCTATTAGAGACAAATGGTTGAGTGTTTGATTC TTAATTCTTGTTAATGAAATAAATTCATTAGTTCTTACCACTTCCTGGGACGAGAAATTAGTCTTATGACTATTGATTTT ATGAGGTATGTTCCTCAACGGAAAAAATTCTAATTCTAAGGCTCCAATTTACAACATTTGACTCCTTATTTGTATTTGGT TTCTTTTCTTATGAGTAGGGATGACAATGAGTCTAGGTACCCGCAAAAATTTCCTATAATGTTTAGGGTAAAATTAAAAC CCGTTAGATAGGTATGCGGTTTGGGCATGAGTAAATACCCGCAAAAAATAATGGGTATGAGTGCGGGTATGAGAACTATA ATAGCCAACCGGCCATACCCGCACACACATTATACATTCACACATTCATATAATTGATAGTATATTAATAAACTTAAAGT AGAGAAACTATATTAGATTGAGGGATTCCGCTTAATTTTAAAAGTAGAGACTATATTAGATCGAAAAAAAACTATTGGGG CCAAAGTTACTCAAAGACCAAATTAAGGGGGGAAAATGAAATTAAACCTCATACATTTATAAAAATCTAAAATATTCATC ATGTTTTTAAGATACATCAAGATGAATAAAATATTGACATTTCGAAATGTATGAAACAGACAACCCTTTAATTATAAATG TCTTTTTGTTTGAATTTTATATCACACAAATAACCATTGTGAGCTTAATAATTATGATTCAACGGTTGGATTGATAAAAA TCATATTCTGTCTAAAGTTGTAACTGGACCCCTTTCCCATAGGCCATAACACATGCACATATGACTATTTGCATCATGTA GTGTGCAGAGCAGAACATACATCTCTAGATAAAATTATTTATTTCCTTTAATTCATCCTTTCAAGACTTTCCATTTGCAA TTTTCAAGTTGTATTTATCTTCATTAATTAACTGAGTAAAAAAGCCTGATAGCGAACATACTCATAAGTCATACTCATAA CCCTATACAACGTTGAACTACATTTAAGAGGTTTAGTTTCTTAGCAGTACTCATAAATGCAGGGAAAAGATGAAACTACA GTTTAATTCACTTGCAAAATAGACAGTTTATAACTAAGTACATGCAAATCTCAAGAACTGCTTTCCTTTTCTTCTTTGGT ATTGTCAGCTACATCTATGAAAATTTTCCATTGTGGTTTATCAAATGTTACTAGTGTTTAAACAACATGCAATGTATTGT TTCTAAGTTCATGATTATGACAACCCAATTTGGTAGCATTGTGCTATTGTCATAATGCTTGAAATTAAAACTAAGTCTAG TAACAAGATATACTGAAATATTTCCTTTTCTAGAGTTATTTCTCTAATTCATACCCAGTGATTTCTCTTCTTTTGCAGGT TCAATATTGTTGGTCAGGTATTCTTGAGAAGTCACTTGTGCTAGACTTTCTACATCTTTCACTTTTCAGCAAAAGGACAA TTTTGTTCAATGGAGATTTCTGACAATCCATTGAGCTCTAACTGCTAATTCCGTTTCGTGTGTAGTGGGCAGTGACAACA AGTATAGATTATTCCCTTGCACAACTGATTCAAGTTATCATTCTCCTTAGCACTGGTGGGAAAAATGGTGGTGGATATGA GGCTTCTAAATATGTAGTTATTGCTTTCCATGGTGGAATTTTGCTCTTACATGGCATAATAAACAGCCTCCCTATCTCAT TATTATCATTCTTAGGACAGCTAGCTGCTATATGGAACGTTCTAGGTATGATGAATAAATTTCCTGTTAGATTTTCTTTA TATCTAAATTCAATTTATCAGGAAAAATCCTGTTTAGATCTCTAATTCATGAAATGAGTACATTTTCAGGTGTTCTTGTG CTTATGATTCTCATTCCATCTGTTGCAACGGAAAGGGCTAGTGTGAAGTTTGTTTTCACTTATTTCAATACTGATAATGG TGATGGAATCAACAGCAGATGCTATATTTTTCTGCTTGGACTTTTAATGAGTCAATATACCCTGACTGGGTATGATGCAT CAGCTCATATGGTAAGTATTTTCTTTTTCAATTTAGGAATTTTGTTTTTAATTTCCATTGAGGGATTGAAGTTTTTAAAC GGTTTAGACTAAGACGTTCTGCTTAAAGCTAGCTTTTATATGCAGACAGAGGAAACGAAGGATGCTGAGAGAAATGGACC AAAAGGAATTATTAGTTCTATTGGGTTATCTATTATTGTTGGATGGTGTTACATACTAGGCATTTCCTTTGCAGTTACTG ATATCCCTGGCCTTTTAAGTGATGATAATGAGGCTGGTGGGTATGCAATTGCTGTGAGATATTTTATCTGGCATTCAAGA GTAGATATGGCAATGGAGTTGGTGGTATTGTTTGCTTGGGAATCGTTGCTGTTGCCGTATTTTTCTGTGGCATGAGTTCA GTTATGAAACGACCCGTTTTACTATATATCAATTCCTATTTCTAATATTATTATAATATTATTATTAAAAGAAATAGAAG AGGATAAGAATAAAAAGAAAAAAAAAAAAGAAACTAAGCCCACGGCAACAATGATATAACCCCACCCCATCACATTTTTA TCAAGCCCGTTACTTTCTTTCTCTGGTTCCAAAATTCTTTTCCTTGCCTCTCGAAATTTCTCTTGCTGCAACAATGAGTT CCTTTCTCTCCTATTTTCTTCATGCTTCTTTTTACTCACCCAAACCACATTTAAATCGCGACAGAGAAGTATATGCAACT GAAGGAAAAGTTGTTCATTTAAGTGGAAGAGATTTTGGGATGATTTTGGAGTTAGGGTTTGTGCTATGTGAAAGGAGAAG AGTACCCACTCTTACAGAACTACTTATTTGGTTATTGAGGTATACCTTCAACCTACAAATTTCAATAATAGTATTATAGT ATAGGTTAGAATTAAGTACAATTATTTTTAGGGATTTGGGTGCATAATTGGGGATTTTGTACTTGCTCACGGGTAGTATC ACATAAGATAATTAATGCTGAAGGTTTCAAGTTAAATTTTGGTGTTCAGATTCGTTGGCTAGTGGATTGTACGGTTGGCG TTGAGCTGTTGAAAGCGGTCCAGTTGATTCGCCTTTGTTGTGAGTGGTTTTCAATCATTGTGGCATAATTTTATTACTCT ATAATTGTTATTTATGATTATTTTGATATATTACCTATATATTTAAATTGGGGAAACATGTTTTGTAATTCGTGAATTAT TTGACAGCTGGTTTTATGAAGTTGATCTGAGTCTGATTCTGAACTAACATGAGAAAATAATTTATATTGCTTTGATTTTG GAAATTATGTGAAACTGAGATTATGAACTTGGAAAGTTGATTTTGAGACTTTGATGAGACTTAACCTGGTTTGAGAAAAC GGTTTTGGGGATCCTTGATAGAACCCCGTAGCCGTTAACGGAGGTAACGGCCTAGGTGCACCTAGCTAGATTGATTCCGG GAGGAGAGAGCTATCCGTTAGATGGAGCCGCCAGTGCACGGAGAGGGCTATCAACGAGATGTAGCTTCCCCCGATGAGAT ACGATACGATATATGATGTGAGAGAGGAAAGGGCTATCCGTTAGATGGAGCCGCCCCTATCGGATAGGCCATCCCTTAGG AGGAGAGGGCTATCAACGAGATGGAGCCGCCTCACGGTTCTACATGTGTGACCCTATGATATTAAATTTATGGTTTTATG TTTTCATATCAGGACATGATTTTAACTGTATTTATTTGAAGTGATTATTAATGAGCTTTATGATTTTTTTTTGTCAAGTT CATTCTGGAAATGATTTAAACTGGTATTATTGTTGATATAAACTGTTTATACACGAGTTGAGAGAGAAAAACTCGTGCCT ATTCGGTTTCCCCTTCCTGTTCATGGTGGTTGTTGACTGCTCACTAAGTCTTTGTGACTTACTCCATTCCTTATTTCCCT CCACAGATTTTCAGGCAACTGAGTAGCAGACTGTTGTCAGGTTCAGATCATTCGACTTAGTTCCTTTGGCAGGTTGTCAT GTTGGTGTCTTTTATTTAAGTCTGGTTATCTGCAGCTATAGGGAGTCATAGGTGAATTTAGTTTGGGATTGACGTTATCG TTTTATTTTTAAAAGTTGACGCTGAGCATTGAATTCTGGTTTTGTACATTTTCTTGAAATTTTGGATTTGGAGAATATTA TTTAGCAGGTTATATTATTTTGAGATTACTAAAAATACAGAGGAGACTCTATCTTTTTTTTATAAAATTTATGCTGACGT ATTTATCATGGAGAATTGGTTATAAAATGGGTTATGTGGAAAGGCTTGCCGGACTTGGGGTGATAGTCCGTGCGCCGGTT GCGACGAGAAAATTTGGGTCGTGACAAGTTACCAGCAACTCAAGGTAGTACTTCCAATTCTTAGGATACATGGTAGAAAA CTACAGTAAAGCTAAAATGATACTGGACAGTCCCATAAGTTAAGGGAAGTTATCTCACCGTGATTTTGGCTCACTGTGTT CTCTCATTTATGTATGACATGGATTTGATTGATCTCTTGGGATACTTATCATGTTTGAAAAATATGCAGAATGACTTATG CTTTCTCTAGAGATGGGGCCATGCCATTATCTTCATTGTGGCATAAAGTTAACAAACAGGAGGTCCCCATATATGCAGTT TGGCTTTCCACTGTTATTTCATTTTGCATGGCACTAACGGTAAGTAATATTTTCAACCATTTCTCTAATTTTTGGTAAAA AGTACTTCGAAATGAAATGTAGCTGTGATGAAATTGTAGACCATTTCATCAATCCAACTTGGCTTAGAAGTTAGAAGTAC TGATGGATGTACAAAATTCTAAGAATGGTTTTTATAAAACTTAACAGTTTTTCTTATGCCAAAACTCATAATGTTTTGTG TACCATGTTTGTGATATTAATGCAGACTAGTTCATAGCTCAAACTAACTCTCAAATGCAATAGTTTCATTCAATTCTAAC TCTACTGCAGTCTCTTGGAAGCACAGTGGCGTTTGATGCCATGGTGTCCATAGCAACAATAGGCCTCTACATTGCTTATG CACTACCAATCTTCTTCAGGGTGACTCTGGCACGCAAGTCTTTTGCCCCGGGACCCTTCAACTTGGGTCGTTACGGGACC TTTGTTGGTTGGATTTCAGTTATTTGGGTGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCCTACCCAATAACCAT TGAGACGTTTAACTACACCCCTGTAGCTGTTGGATGTTTGCTACTGCTTGTTATTTCTTACTGGATATTCAGTGGCCGGC ATTGGTTTCAAGGCCCTATAACCAATATAGATATATGAAGTTGTATACATACATGGTGATTTCATTGCAATAACATATGT CTAATAGGATCATGAACCACTATTTGTAATTTATTTTTCTGATTGATATCCCCCCCCTCCTCCTATATTATTATATCTAA ATATGGTCAAGCCTAACCTGAGCCAATTTGACAAATGGCTAGGTGATATTCTCTTTGACGTGGTCGCGGTCACGCTGCAA AGTGGATGCTTGAAAATTCTTCTTTAGTTAATTTTAAAAACAGAACCAATTTTAGGAA
CDS sequence (LotjaGi2g1v0273400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGAAGCAGTAGAAGAGTTCAATTCCCAGAAGAAGATGGAGATCCCTATCTTCCTCTCTGCCCCAGAGACACCAC CTCCACATCACAATCACACGGTTCCTCCCAAGACCTGCGTCTGAATCAACTCGGTTACAAGCAAGAACTTCGCCGCAACT TATCGGCAATAGCGAACTTCTCGATGACCTTTTCGATTGTGTCAATAATGACCGGGCTGACGACGTTGTACGGGACGGGG CTGAGATTCGGAGGGCCGGCGAGCATGGTGTACGGGTGGTGGGTGGTTGGTGCTCTCACAATGGCGGTGGGTCTGTCCAT GGCTGAGATCTGTTCGGCGTACCCGACCTCCGGCGGGCTTTACTTTTGGAGCGCCAGGTTGTGCCGCTCTCACTCCGCGG CTCCCTTCGCTGCTTGGCTCACTGGCTGGTTCAATATTGTTGGTCAGTGGGCAGTGACAACAAGTATAGATTATTCCCTT GCACAACTGATTCAAGTTATCATTCTCCTTAGCACTGGTGGGAAAAATGGTGGTGGATATGAGGCTTCTAAATATGTAGT TATTGCTTTCCATGGTGGAATTTTGCTCTTACATGGCATAATAAACAGCCTCCCTATCTCATTATTATCATTCTTAGGAC AGCTAGCTGCTATATGGAACGTTCTAGGTGTTCTTGTGCTTATGATTCTCATTCCATCTGTTGCAACGGAAAGGGCTAGT GTGAAGTTTGTTTTCACTTATTTCAATACTGATAATGGTGATGGAATCAACAGCAGATGCTATATTTTTCTGCTTGGACT TTTAATGAGTCAATATACCCTGACTGGGTATGATGCATCAGCTCATATGACAGAGGAAACGAAGGATGCTGAGAGAAATG GACCAAAAGGAATTATTAGTTCTATTGGGTTATCTATTATTGTTGGATGGTGTTACATACTAGGCATTTCCTTTGCAGTT ACTGATATCCCTGGCCTTTTAAGTGATGATAATGAGGCTGGTGGGTATGCAATTGCTGTGAGATATTTTATCTGGCATTC AAGAGTAGATATGGCAATGGAGTTGGTGGTATTGTTTGCTTGGGAATCGTTGCTGTTGCCGTATTTTTCTGTGGCATGA
Protein sequence (LotjaGi2g1v0273400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRSSRRVQFPEEDGDPYLPLCPRDTTSTSQSHGSSQDLRLNQLGYKQELRRNLSAIANFSMTFSIVSIMTGLTTLYGTG LRFGGPASMVYGWWVVGALTMAVGLSMAEICSAYPTSGGLYFWSARLCRSHSAAPFAAWLTGWFNIVGQWAVTTSIDYSL AQLIQVIILLSTGGKNGGGYEASKYVVIAFHGGILLLHGIINSLPISLLSFLGQLAAIWNVLGVLVLMILIPSVATERAS VKFVFTYFNTDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEETKDAERNGPKGIISSIGLSIIVGWCYILGISFAV TDIPGLLSDDNEAGGYAIAVRYFIWHSRVDMAMELVVLFAWESLLLPYFSVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 37 | 37 | - | – | |
| Phobius | 1 | 55 | 55 | - | – | |
| PANTHER | 18 | 351 | 334 | 6.6E-170 | – | |
| PANTHER | 18 | 351 | 334 | 6.6E-170 | – | |
| MobiDBLite | 23 | 37 | 15 | - | – | |
| PIRSF | 33 | 369 | 337 | 3.3E-34 | – | |
| Gene3D | 55 | 366 | 312 | 1.6E-17 | – | |
| TMHMM | 56 | 78 | 23 | - | – | |
| Phobius | 56 | 79 | 24 | - | – | |
| Pfam | 60 | 328 | 269 | 1.4E-33 | ||
| Phobius | 80 | 90 | 11 | - | – | |
| ProSitePatterns | 84 | 115 | 32 | - | ||
| Phobius | 91 | 112 | 22 | - | – | |
| TMHMM | 93 | 115 | 23 | - | – | |
| Phobius | 113 | 132 | 20 | - | – | |
| Phobius | 133 | 152 | 20 | - | – | |
| TMHMM | 136 | 153 | 18 | - | – | |
| Phobius | 153 | 157 | 5 | - | – | |
| Phobius | 158 | 174 | 17 | - | – | |
| Phobius | 175 | 185 | 11 | - | – | |
| Phobius | 186 | 211 | 26 | - | – | |
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 212 | 216 | 5 | - | – | |
| TMHMM | 216 | 235 | 20 | - | – | |
| Phobius | 217 | 235 | 19 | - | – | |
| Phobius | 236 | 297 | 62 | - | – | |
| TMHMM | 255 | 277 | 23 | - | – | |
| Phobius | 298 | 320 | 23 | - | – | |
| TMHMM | 298 | 320 | 23 | - | – | |
| Phobius | 321 | 350 | 30 | - | – | |
| Phobius | 351 | 371 | 21 | - | – | |
| Phobius | 372 | 372 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Amino acid transport | The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0273400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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