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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0334900 |
| Transcript ID | LotjaGi5g1v0334900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid permease; TAIR: AT2G01170.1 bidirectional amino acid transporter 1; Swiss-Prot: sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog; TrEMBL-Plants: tr|I1NFQ4|I1NFQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0334900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65200905..65206464) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGAGCACTGAGCTGGGGACTCTCCGTAACATGGGTACCTATGGCTAAATCCATGCGCCATATTTTCTGGTAGTCTGC CACTTGGTTGGTACTGTTTCTGGGCTCCAATTTGATTAATAAGAGAGGCATAAGGGTGAAGAGAATCACAATGATTAAAT ATCTATTTAGCTGGTTCATCATTTGGTTGTTGCGTTGATCCAATTTGCCATTTAGCTTTTCCGCATAAGGCACCTATTGG TCTTCATTGTCAGATTGCTAGGAAACAACCACGAGTTGGGTAAGTTGGTTTGAATGTGGAAGTTCTTTAAGGAATCCAGG AGTTTCAGGTTTTTGTGGCTTTGTTTCTAATGAGGTTAGTGGGTGAATAATGGGGTTTTCTAACAATTTGGGTTGTGGGT ATATGACTGAAATTCCTAAGTTGTAGCTTTTGGCTCTTTTTTATGGGCCTGATCTTTTATGGAAACGTAATTTTCGCAAA GTTGTGGTGTCGTCTCACATTTGTCAGAAATATGCCCTATATAAATGATTTTTTGATGATTCATCTTTTGAATAAATGTC TTATACATTCAGAAAATTGTAGTAATCTCTCATAATAAATAATTTTTCAATAGTTCATGTTTAGTTCGACTTCTCTAAAG TGAGAAAGTCACTTTAGATACGATTTTTCTAAAGTGAGAAAATCCCGATTATCCCAACCGTTAATTAAATTGCTTTATTA TTAAGTAATTATTATTAATGGTCGAGGTAAATTACATTATTCCTTAAAAATAACTTTAAGAGCCAATTGGTACTATCACA CATAATTATATAATTATATGGTGTGTGCGTGTATTCAGTATGAGCTGACAAATCTCCGTTTTGTAAGGAGGACAGTGAGG CTAGATGAGACAACACACAAGTGTTTTTCTTCGTGTTGACCAAAGCATCTCATTCCATTTCTATTTCATTCTAACTCTTC TTCATCTTCTTCCTCTGTCTCGCTCTCTCTTCACCTTCATTGGATTACACCAGAGAGATTCAATTCATTCTCTCTGGTTA ATCTTAACCAAACCAGAGAGAAAGCAGAACAGAGGAGCCACCCTCATCCATTCCATTCTCTCTCTGTTTCCCCTGCCTCC ACCATCATGGGCCCTCCTCCTCTTGATTCCGGCCATGCCCGTCTTCACGAACTCGGTTACAAACAAGAACTCAAGCGTGA CCTCTCGTATACTCCTCTTCTTTATTTCAATTTTTCAATTCAACCCCTGTTTTTTTTTCTTCCTTCATTTCTTCTTCTTG TTTCAAATTTGCAGGGTCCTTGCAAATTTTGCATTTTCGTTCTCCATCATATCAGTGCTCACCGGAGTAACCACCCTTTA CAACTCCGGCTTGACCTACGGTGGCCCTGCTTCATTGGTATATGGCTGGCTTATTGCCTCTGCTTTCACCATGCTTGTTG CCCTGTCAATGGCTGAGATTTGTTCATCTTATCCAACATCTGGTGGTCTTTACTATTGGAGTGCCAAGCTTGCTGGACCT GGATGGGCACCCTTTGCTTCCTGGATTACTGGCTGGTACTCTCCTCCACCCAAATATTTTACGAGCTAGGCCTATTTGAT ATGATGATTATACAATTGATTCTAAAGTCAAAATTAGTTATGTGAAGAAACTTATATGAGTAGCTTTTAGGTTTCATCAG AAATGATTTGACTAAAGAGAAATTGCAATCCTGGTGTTATAAAGCTCTCGCTATTTGCCTGACCGCACCCCAATTTGTCG ATCTAGACAGTTTTATTTACCTTGTATTATTTTTGCAAGAGAGTGATTCTACCTCGAAACGGTGACCGGATAGTCACATT ACAACAATCTTACCGTTGGCCCTCTATACTATATGTTCCATATCCCAATGTAATGGGTACTGTTTTTCTCTGAAGAACAC CAGAGTACTAGACATAGGCTATTACTAATTAGCTATGTGCCTCACTAGTCCCTGCCTGCCCTGAAATAATTGAATGGCTA TAGTACAATAGATGTCTCATTCTCTCTCTCTAACTCTCTAGTCTTTGTTTTCATTTTGACACCTCATCACCTCTTTTCCA AGCTTAGCAATTGTCTTAACACCTATCCAATGTCTGTACAAAAATAAACACCTATGACCTATCCAATGTATTGACATTGA GGATTTCCCTTTGTGGTACAATGCAATGCATATTCATTTTGCTGATCTGTCATTGGAATCACTTGCATATTTTTCTTTGT CATATTTATATCAATGACTTTGGATTAATTACTAATTTGTGTTCCCTACCACATGAAGGTACCTCAGTCAGCACTGTTGT CTTTATCTGATATATTAGATGTTATGCTTGGTAGTATTTAGCATTTCAGCTACCATTCTCAATTCAAAATTTTGCTATAT CTTCCTCATAATCTTCCCAATACTTAAAACAGTAACTGATATAGTTGATACTAAAATTTTCATAGAAAGTTAATAGTAAA TTCCTTATTCATTCCAAATTTCCTATGTTCCCTGTTCTCAAGATTTTGCATCTGCAATTTTCAAGTTGCATTTATACTTC AGTTTGACTTGTGAGTTAGAAAAAGCCACAATCACAGACATGTGGATAACATTTTGTACTACAATTTGAACTATATTTTA GAGACTTCATTATTCACTAGTATAATCATAAGATCAACAAGATGAAAACTTCTGTTAAACTCACATCGCATAGCCTTAAT GCACTCCTTTCCTTTTTGTTTGCTTCTCAATTTTACAATTTAAAATGTTCAAACAGATTTATGAAAATGTTATTCTCTTC TTAACCAGCATGCAATATCTCATTATGTACTATGTGACTACAGATATTTAGTTTGTAACTCTCCTTAATGGCACATAGCT TGAAAATGAAGTTATTGCTAATCAGCAGGTTCTAATAATAAACTACACTGCTATATTTGCTCTCTTCAGTCATTTCTTTG ATGTGTGTTATGGATAATAGATGGTTTATCTTTTTTTGCAGGTTCAATATTGTGGGGCAGGTATTCTTAAGAAGGCACAT ATTCTAGAATTTCAACATCCTTCACTTTTCGCTGCAAGGTCAAACTTGTCTGGGATGTAGATTATGATTATCCAATCGAC GCTCTAACTTCTGATTTCTTTTCACTTGCAGTGGGCTGTGACAACAAGCGTGGATTTTTCACTTGCACAACTGATTCAGG TTATCATTCTCCTTAGTACTGGTGGGAAAAATGGTGGTGGATATGAAGCAAATAAATATGTAACTATTGCTTTCCATGCC GGACTTTTAGTCCTACATGGGATAATAAACAGCCTTCCAATTTCATGGTTATCATTCTTAGGGCAGTTGGCGGCTATCTG GAATGTTTTAGGTATGAAGAAATTTCCTAGTTGATTTATACATTTTCTAAGTTCAGTTCTCAGAGGTAAGTATTTTGGGA TCTTTTTTTTTAGGTGTTTTTGTGCTTATGATTGCCATTCCATCGGTTGCAACGGAAAGGGCTAGTGCCAAGTTTGTTTT CACTCATTTCAATACTGATAACGGTGAAGGAATCAACAGCAAACCCTACATATTTCTCTTGGGGCTTCTAATGAGTCAAT ATACCCTAACCGGGTATGATGCATCAGCTCATATGGTAAATCGTTAGTACATTTTTCTTTCATTTCTCAGAATTTTTTGT CTTGAAAAGCTCTAAGAAATTTCTTGTCTTATAAATTTTCCTAGTTTAAACTCATTCCATGAGATTATAAACACTAGCAT TGGCCAAGCTTGTAGATCCATCTTAGGAAAAGGTCAAGATGTAGTAACATGAAAGTTGGCTGTTAGAACTGACTTTGTTT CTGCATTAATTTGATATGTCCTCTGCTAGTAACCTCAGTTTAAGTTTCAGGAGTTATTAGGTGTGTGTTTGGATACAAGT ACAATGTGAACAAACTTTTGCCCCACTCAATAAGAGTTTTGCTCGCTTTTTGTCTCAAAGTGATTGTCAACATCTGTTTG CCCTAGTACTAACGGGTATCCAAACATAGGCTGAAGTTGCTCTTTCTTTTCCACTTCGAAAATCTTGTTGTGGTATCCAT TTACTTTCATAGGTTGAAGTTACTAAATGATTTAGACTAAGATTTGTATCCTGTTTACTTTAAACTTTAATTTCAGACAG AGGAAACCAAAGATGCTGATAGAAATGGACCAAAAGGCATTATAAGCTCTGTTGGAATATCTATTATTGTTGGATGGGGG TACATACTAGGCATTACTTTCGCAGTCACTGACATCCCATACCTTTTGAATGAAAATAATGATGCTGGTGGATATGCCAT AGCTGAAATATTTTATATGGCATTTAAGAGAAGATATGGCCATGGAATTGGGGGTATTATTTGCTTGGCAATTGTTGCTG TTGCCATCTTTTTCTGTGGTATGAGTTCAGTTACTAGCAATTCAAGGTAACCATCTCTCTTTAGTGCTTTTTCCTTATGA GAGGGATTTAACATCTTTGGTTACTTATGGTGCTTAAAATTTGCACAGGATGGTTTATGCTTTCTCAAGAGATGGGGCAA TGCCACTGTCATCATTGTGGCATAAAGTTAACAAGCAAGAGGTCCCCATATATGCTGTTTGGCTTTCCGTTTTGATATCA TTTTGCATGGCACTAACGGTATGCATTTTGTCATAAACGCTTAATTTAGCTGTTTTCTCAAACGCACTCTAATTGGTTAT TGTCATAAGCGCTTAATTAAGTTGCTTACCCCACAATAGGCATAGTTCTTATCATTCTATTCTTGCCGCGTCTCTAACTC AATTCAAACTTCATTGCAGTCTCTTGGAAGCATGGTGGCATTTCAAGCTATGGTCTCCATAGCAACGATTGGCCTTTACA TTGCTTATGCCTTACCAATCTTCTTCAGGGTGACCTTGGCACAAAAACGTTTTGTCCCGGGACCTTTCAACTTGGGTCGT TATGGCGTCATTGTAGGCTGGATTGCGGTTCTTTGGGTGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCCTACCC AATAACCATTGAGACACTTAACTATACCCCTGTTGCTGTTGGATGCTTGCTCATTCTTGTAGTTTCTTACTGGATAATCA GTGGTCGGCGTTGGTTTAAAGGCCCTGTAACCAATATACAAGTGAAGTTGTGAACTTGTGTATTAAATTGAACTCTTGTT GAATATGATTATTTTTTGAACCATTGTCTAGAATTTATGTTTCTAAATCATGTTTAATGCCAAACCCATGTTTTCCATCC ACACAAAAAGCACCATCCATATTGATTTTAATAACATCCAAACTGGGTACAGGGATCTCCCTCTGTCTAACTTGATCAGG ATGAAATTCATGTGGAGTGCACAAGGAATGATCTCTACTAATAACCATCTCAGCAGAATGCAATCTATTATCATCGACAT TCTCATTCTCGCTCCAAAAGAATTTGCTAATCATCGCTTTAATATGTAAACCAAGATTTTGTGGAATTGCTAAATAAGAC ATGGTATAACTAGTGGCGGAACTTGAAGAAAAAATTTGAG
CDS sequence (LotjaGi5g1v0334900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCCCTCCTCCTCTTGATTCCGGCCATGCCCGTCTTCACGAACTCGGTTACAAACAAGAACTCAAGCGTGACCTCTC GGTCCTTGCAAATTTTGCATTTTCGTTCTCCATCATATCAGTGCTCACCGGAGTAACCACCCTTTACAACTCCGGCTTGA CCTACGGTGGCCCTGCTTCATTGGTATATGGCTGGCTTATTGCCTCTGCTTTCACCATGCTTGTTGCCCTGTCAATGGCT GAGATTTGTTCATCTTATCCAACATCTGGTGGTCTTTACTATTGGAGTGCCAAGCTTGCTGGACCTGGATGGGCACCCTT TGCTTCCTGGATTACTGGCTGGTTCAATATTGTGGGGCAGTGGGCTGTGACAACAAGCGTGGATTTTTCACTTGCACAAC TGATTCAGGTTATCATTCTCCTTAGTACTGGTGGGAAAAATGGTGGTGGATATGAAGCAAATAAATATGTAACTATTGCT TTCCATGCCGGACTTTTAGTCCTACATGGGATAATAAACAGCCTTCCAATTTCATGGTTATCATTCTTAGGGCAGTTGGC GGCTATCTGGAATGTTTTAGGTGTTTTTGTGCTTATGATTGCCATTCCATCGGTTGCAACGGAAAGGGCTAGTGCCAAGT TTGTTTTCACTCATTTCAATACTGATAACGGTGAAGGAATCAACAGCAAACCCTACATATTTCTCTTGGGGCTTCTAATG AGTCAATATACCCTAACCGGGTATGATGCATCAGCTCATATGACAGAGGAAACCAAAGATGCTGATAGAAATGGACCAAA AGGCATTATAAGCTCTGTTGGAATATCTATTATTGTTGGATGGGGGTACATACTAGGCATTACTTTCGCAGTCACTGACA TCCCATACCTTTTGAATGAAAATAATGATGCTGGTGGATATGCCATAGCTGAAATATTTTATATGGCATTTAAGAGAAGA TATGGCCATGGAATTGGGGGTATTATTTGCTTGGCAATTGTTGCTGTTGCCATCTTTTTCTGTGGTATGAGTTCAGTTAC TAGCAATTCAAGGATGGTTTATGCTTTCTCAAGAGATGGGGCAATGCCACTGTCATCATTGTGGCATAAAGTTAACAAGC AAGAGGTCCCCATATATGCTGTTTGGCTTTCCGTTTTGATATCATTTTGCATGGCACTAACGTCTCTTGGAAGCATGGTG GCATTTCAAGCTATGGTCTCCATAGCAACGATTGGCCTTTACATTGCTTATGCCTTACCAATCTTCTTCAGGGTGACCTT GGCACAAAAACGTTTTGTCCCGGGACCTTTCAACTTGGGTCGTTATGGCGTCATTGTAGGCTGGATTGCGGTTCTTTGGG TGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCCTACCCAATAACCATTGAGACACTTAACTATACCCCTGTTGCT GTTGGATGCTTGCTCATTCTTGTAGTTTCTTACTGGATAATCAGTGGTCGGCGTTGGTTTAAAGGCCCTGTAACCAATAT ACAAGTGAAGTTGTGA
Protein sequence (LotjaGi5g1v0334900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGPPPLDSGHARLHELGYKQELKRDLSVLANFAFSFSIISVLTGVTTLYNSGLTYGGPASLVYGWLIASAFTMLVALSMA EICSSYPTSGGLYYWSAKLAGPGWAPFASWITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKNGGGYEANKYVTIA FHAGLLVLHGIINSLPISWLSFLGQLAAIWNVLGVFVLMIAIPSVATERASAKFVFTHFNTDNGEGINSKPYIFLLGLLM SQYTLTGYDASAHMTEETKDADRNGPKGIISSVGISIIVGWGYILGITFAVTDIPYLLNENNDAGGYAIAEIFYMAFKRR YGHGIGGIICLAIVAVAIFFCGMSSVTSNSRMVYAFSRDGAMPLSSLWHKVNKQEVPIYAVWLSVLISFCMALTSLGSMV AFQAMVSIATIGLYIAYALPIFFRVTLAQKRFVPGPFNLGRYGVIVGWIAVLWVVTISILFSLPVSYPITIETLNYTPVA VGCLLILVVSYWIISGRRWFKGPVTNIQVKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 7 | 508 | 502 | 1.5E-286 | – | |
| PANTHER | 7 | 508 | 502 | 1.5E-286 | – | |
| TIGRFAM | 13 | 503 | 491 | 2.1E-190 | ||
| PIRSF | 13 | 507 | 495 | 1.1E-57 | – | |
| Gene3D | 23 | 499 | 477 | 1.2E-32 | – | |
| TMHMM | 26 | 48 | 23 | - | – | |
| Pfam | 26 | 481 | 456 | 1.6E-64 | ||
| Phobius | 28 | 49 | 22 | - | – | |
| Phobius | 50 | 60 | 11 | - | – | |
| ProSitePatterns | 56 | 87 | 32 | - | ||
| Phobius | 61 | 80 | 20 | - | – | |
| TMHMM | 63 | 85 | 23 | - | – | |
| Phobius | 81 | 91 | 11 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 92 | 115 | 24 | - | – | |
| Phobius | 116 | 120 | 5 | - | – | |
| Phobius | 121 | 141 | 21 | - | – | |
| TMHMM | 129 | 151 | 23 | - | – | |
| Phobius | 142 | 152 | 11 | - | – | |
| Phobius | 153 | 172 | 20 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| Phobius | 173 | 177 | 5 | - | – | |
| Phobius | 178 | 202 | 25 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 203 | 268 | 66 | - | – | |
| Phobius | 269 | 291 | 23 | - | – | |
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 292 | 320 | 29 | - | – | |
| Phobius | 321 | 342 | 22 | - | – | |
| TMHMM | 324 | 346 | 23 | - | – | |
| Phobius | 343 | 375 | 33 | - | – | |
| Phobius | 376 | 396 | 21 | - | – | |
| TMHMM | 378 | 400 | 23 | - | – | |
| Phobius | 397 | 401 | 5 | - | – | |
| Phobius | 402 | 427 | 26 | - | – | |
| TMHMM | 405 | 427 | 23 | - | – | |
| Phobius | 428 | 438 | 11 | - | – | |
| TMHMM | 439 | 461 | 23 | - | – | |
| Phobius | 439 | 463 | 25 | - | – | |
| Phobius | 464 | 474 | 11 | - | – | |
| Phobius | 475 | 494 | 20 | - | – | |
| TMHMM | 476 | 495 | 20 | - | – | |
| Phobius | 495 | 511 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Amino acid transport | The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0334900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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