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IPR005062

Source: InterPro

Description

IPR005062 is a SAC3/GANP/THP3, conserved domain.

<p>This domain contains one highly conserved negatively charged residue and one highly conserved positively charged residue that are probably important for the function of these proteins. Proteins containing this domain include the yeast nuclear export factor Sac3 [[cite:PUB00014954]], and mammalian GANP/MCM3-associated protein, which facilitates the nuclear localisation of MCM3, a protein that associates with chromatin in the G1 phase of the cell-cycle [[cite:PUB00075377]]. It also includes yeast Thp3 (THO-related protein 3), which may have a role in transcription elongation [[cite:PUB00075376]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj3g3v1855370.1
– PREDICTED: 80 kDa MCM3-associated protein-like isoform X1 [Cicer arietinum] gi|502168054|ref|XP_004514308.1|
Domains
4
Lj5g3v2288990.1
– Leukocyte receptor cluster member-like protein [Medicago truncatula] gi|357461645|ref|XP_003601104.1|
Domains
5
Lj5g3v2288990.2
– PREDICTED: leukocyte receptor cluster member 8 homolog isoform X3 [Cicer arietinum] gi|502117423|ref|XP_004495816.1|
Domains
5
Lj6g3v1901400.1
– G1121 protein [Medicago truncatula] gi|357447585|ref|XP_003594068.1|
Domains
8
LotjaGi3g1v0311800.1
– SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein; TAIR: AT3G54380.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family; Swiss-Prot: sp|Q67XV2|SAC3C_ARATH SAC3 family protein C; TrEMBL-Plants: tr|A0A0B2PLU1|A0A0B2PLU1_GLYSO 80 kDa MCM3-associated protein; Found in the gene: LotjaGi3g1v0311800
Domains
6
LotjaGi5g1v0359900.1
– SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein; TAIR: AT2G39340.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family; Swiss-Prot: sp|F4IUY8|SAC3A_ARATH SAC3 family protein A; TrEMBL-Plants: tr|A0A0S3SL83|A0A0S3SL83_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0359900
Domains
8
LotjaGi5g1v0359900.2
– SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein; TAIR: AT2G39340.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family; Swiss-Prot: sp|F4IUY8|SAC3A_ARATH SAC3 family protein A; TrEMBL-Plants: tr|A0A0R0EFN0|A0A0R0EFN0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0359900
Domains
8
LotjaGi5g1v0359900.3
– SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein; TAIR: AT2G39340.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family; Swiss-Prot: sp|F4IUY8|SAC3A_ARATH SAC3 family protein A; TrEMBL-Plants: tr|A0A0R0ES49|A0A0R0ES49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0359900
Domains
8
LotjaGi6g1v0302600.1
– SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein; TAIR: AT3G06290.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family; Swiss-Prot: sp|F4JAU2|SAC3B_ARATH SAC3 family protein B; TrEMBL-Plants: tr|I1MFA7|I1MFA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0302600
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 11.11