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IPR005559

Source: InterPro

Description

IPR005559 is a CG-1 DNA-binding domain.

<p>CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite nuclear localisation signal. They are named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [[cite:PUB00008449]]. CG-1 domains are found in CAMTA proteins (for CAlModulin -binding Transcription Activator), which are transcription factors containing a calmodulin-binding domain and ankyrin repeats [[cite:PUB00019287]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Associated Lotus transcripts 19

Transcript Name Description Predicted domains Domain count
Lj0g3v0121279.1
– PREDICTED: calmodulin-binding transcription activator 4-like [Glycine max] gi|356569172|ref|XP_003552779.1|
Domains
6
Lj4g3v0341140.1
– PREDICTED: calmodulin-binding transcription activator 2-like isoform X1 [Cicer arietinum] gi|502142119|ref|XP_004504800.1|
Domains
28
Lj4g3v2250180.2
– PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max] gi|356564670|ref|XP_003550574.1|
Domains
5
Lj4g3v2573580.1
– PREDICTED: calmodulin-binding transcription activator 4-like [Glycine max] gi|356510899|ref|XP_003524171.1|
Domains
28
Lj4g3v2573590.1
– Calmodulin-binding transcription activator [Medicago truncatula] gi|357520387|ref|XP_003630482.1|
Domains
6
Lj4g3v2573590.2
– Calmodulin-binding transcription activator [Medicago truncatula] gi|357520387|ref|XP_003630482.1|
Domains
6
Lj6g3v0528550.1
– PREDICTED: calmodulin-binding transcription activator 3-like [Glycine max] gi|356511089|ref|XP_003524262.1|
Domains
27
Lj6g3v1559270.1
– Calmodulin-binding transcription activator [Medicago truncatula] gi|357449029|ref|XP_003594790.1|
Domains
26
Lj6g3v2218220.1
– Calmodulin-binding transcription activator [Medicago truncatula] gi|357445841|ref|XP_003593198.1|
Domains
28
LotjaGi4g1v0035100.1
– Calmodulin-binding transcription activator; TAIR: AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2; TrEMBL-Plants: tr|K7KPP6|K7KPP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035100
Domains
29
LotjaGi4g1v0035100.2
– Calmodulin-binding transcription activator; TAIR: AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2; TrEMBL-Plants: tr|K7KPP6|K7KPP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035100
Domains
29
LotjaGi4g1v0312200_LC.1
– Calmodulin-binding transcription activator, putative; TAIR: AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4; TrEMBL-Plants: tr|K7MJU5|K7MJU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0312200_LC
Domains
5
LotjaGi4g1v0335500.1
– Calmodulin-binding transcription activator; TAIR: AT4G16150.1 calmodulin-binding transcription activator 5; Swiss-Prot: sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5; TrEMBL-Plants: tr|K7L3K8|K7L3K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0335500
Domains
27
LotjaGi4g1v0367100.1
– Calmodulin-binding transcription activator; TAIR: AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4; TrEMBL-Plants: tr|K7KQB0|K7KQB0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0367100
Domains
31
LotjaGi4g1v0396800.1
– Calmodulin-binding transcription activator; TAIR: AT2G22300.1 signal responsive 1; Swiss-Prot: sp|Q8GSA7|CMTA3_ARATH Calmodulin-binding transcription activator 3; TrEMBL-Plants: tr|I1K4J1|I1K4J1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0396800
Domains
27
LotjaGi6g1v0102000.1
– Calmodulin-binding transcription activator; TAIR: AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4; TrEMBL-Plants: tr|A0A1J7GDJ2|A0A1J7GDJ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0102000
Domains
31
LotjaGi6g1v0256600.1
– Calmodulin-binding transcription activator; TAIR: AT4G16150.1 calmodulin-binding transcription activator 5; Swiss-Prot: sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5; TrEMBL-Plants: tr|G7IMU6|G7IMU6_MEDTR Calmodulin-binding transcription activator; Found in the gene: LotjaGi6g1v0256600
Domains
27
LotjaGi6g1v0256600.2
– Calmodulin-binding transcription activator; TAIR: AT4G16150.1 calmodulin-binding transcription activator 5; Swiss-Prot: sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5; TrEMBL-Plants: tr|G7IMU6|G7IMU6_MEDTR Calmodulin-binding transcription activator; Found in the gene: LotjaGi6g1v0256600
Domains
27
LotjaGi6g1v0352600.1
– Calmodulin-binding transcription activator; TAIR: AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2; TrEMBL-Plants: tr|G7INW0|G7INW0_MEDTR Calmodulin-binding transcription activator 1; Found in the gene: LotjaGi6g1v0352600
Domains
29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.26