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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2573580 |
| Transcript ID | Lj4g3v2573580.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calmodulin-binding transcription activator 4-like [Glycine max] gi|356510899|ref|XP_003524171.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 869 | 869 | 0 | – | |
| PANTHER | 1 | 869 | 869 | 0 | – | |
| ProSiteProfiles | 1 | 23 | 23 | 15.133 | ||
| MobiDBLite | 16 | 72 | 57 | – | – | |
| MobiDBLite | 126 | 160 | 35 | – | – | |
| Gene3D | 302 | 389 | 88 | 6.20E-09 | ||
| CDD | 304 | 388 | 85 | 6.23E-06 | – | |
| SUPERFAMILY | 305 | 388 | 84 | 1.82E-18 | ||
| Pfam | 305 | 387 | 83 | 9.60E-10 | ||
| Gene3D | 499 | 594 | 96 | 6.00E-15 | ||
| ProSiteProfiles | 500 | 592 | 93 | 14.557 | ||
| SUPERFAMILY | 502 | 594 | 93 | 1.13E-15 | ||
| CDD | 520 | 592 | 73 | 5.51E-14 | – | |
| Pfam | 524 | 593 | 70 | 6.70E-08 | ||
| SMART | 533 | 562 | 30 | 2.80E-04 | ||
| ProSiteProfiles | 533 | 565 | 33 | 11.674 | ||
| SMART | 572 | 601 | 30 | 3700 | ||
| SMART | 650 | 672 | 23 | 220 | ||
| ProSiteProfiles | 651 | 680 | 30 | 7.181 | ||
| SUPERFAMILY | 700 | 756 | 57 | 2.92E-08 | ||
| SMART | 708 | 730 | 23 | 1.3 | ||
| ProSiteProfiles | 709 | 738 | 30 | 7.876 | ||
| Pfam | 712 | 729 | 18 | 0.046 | ||
| SMART | 731 | 753 | 23 | 7.00E-05 | ||
| ProSiteProfiles | 732 | 757 | 26 | 9.359 | ||
| Pfam | 734 | 753 | 20 | 2.60E-05 | ||
| Coils | 829 | 849 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2573580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2573580.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.